Геном прокариот/Материалы:NC 009342

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   LOCUS       NC_009342            3314179 bp    DNA     circular BCT 08-AUG-2007
   DEFINITION  Corynebacterium glutamicum R, complete genome.
   ACCESSION   NC_009342
   VERSION     NC_009342.1  GI:145294042
   KEYWORDS    .
   SOURCE      Corynebacterium glutamicum R
     ORGANISM  Corynebacterium glutamicum R
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Corynebacterineae; Corynebacteriaceae; Corynebacterium.
   REFERENCE   1
     AUTHORS   Yukawa,H., Omumasaba,C.A., Nonaka,H., Kos,P., Okai,N., Suzuki,N.,
               Suda,M., Tsuge,Y., Watanabe,J., Ikeda,Y., Vertes,A.A. and Inui,M.
     TITLE     Comparative analysis of the Corynebacterium glutamicum group and
               complete genome sequence of strain R
     JOURNAL   Microbiology (Reading, Engl.) 153 (PT 4), 1042-1058 (2007)
      PUBMED   17379713
   REFERENCE   2
     AUTHORS   Inui,M., Suda,M., Okino,S., Nonaka,H., Puskas,L.G., Vertes,A.A. and
               Yukawa,H.
     TITLE     Transcriptional profiling of Corynebacterium glutamicum metabolism
               during organic acid productions under oxygen deprivation conditions
     JOURNAL   Unpublished
   REFERENCE   3  (bases 1 to 3314179)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (17-APR-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 3314179)
     AUTHORS   Nonaka,H., Kos,P.B., Okai,N., Inui,M. and Yukawa,H.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-AUG-2005) Masayuki Inui, Research Institute of
               Innovative Technology for the Earth (RITE), Microbiology research
               group; 9-2 Kizugawadai Kizu-cho, Soraku-gun, Kyoto 619-0292, Japan
               (E-mail:mmg-lab@rite.or.jp, Tel:81-774-75-2308, Fax:81-774-75-2321)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP009044.
               COMPLETENESS: full length.


Расположение РНК

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Начало Конец Направление Длина PID Ген COG Комментарий
20471 20547 + 77 145294042 cgR_t01 - 14 Ile tRNA
20559 20631 + 73 145294042 cgR_t02 - 02 Ala tRNA
29083 29155 + 73 145294042 cgR_t03 - 02 Ala tRNA
44267 44343 + 77 145294042 cgR_t04 - 14 Ile tRNA
44355 44427 + 73 145294042 cgR_t05 - 02 Ala tRNA
69124 69210 + 87 145294042 cgR_t06 - 15 Leu tRNA
105305 106842 + 1538 145294042 cgR_r01 - 16S ribosomal RNA
107241 108736 + 1496 145294042 cgR_r02 - 23S ribosomal RNA
108846 110299 + 1454 145294042 cgR_r02 - 23S ribosomal RNA
110424 110544 + 121 145294042 cgR_r03 - 5S ribosomal RNA
311261 311348 + 88 145294042 cgR_t07 - 08 Ser tRNA
322932 323020 + 89 145294042 cgR_t08 - 08 Ser tRNA
323050 323122 + 73 145294042 cgR_t09 - 11 Arg tRNA
327117 327192 + 76 145294042 cgR_t10 - 11 Arg tRNA
329795 329885 + 91 145294042 cgR_t11 - 08 Ser tRNA
340178 340265 - 88 145294042 cgR_t12 - 08 Ser tRNA
397608 397684 - 77 145294042 cgR_t13 - 03 Pro tRNA
434770 434845 + 76 145294042 cgR_t14 - 12 Thr tRNA
635660 635745 + 86 145294042 cgR_t15 - 18 Tyr tRNA
636351 636423 + 73 145294042 cgR_t16 - 12 Thr tRNA
636676 636748 + 73 145294042 cgR_t17 - 12 Thr tRNA
636787 636861 + 75 145294042 cgR_t18 - 16 Met tRNA
636955 637030 + 76 145294042 cgR_t19 - 20 Trp tRNA
992918 992994 + 77 145294042 cgR_t20 - 16 Met tRNA
1012945 1013021 + 77 145294042 cgR_t21 - 16 Met tRNA
1020717 1022254 + 1538 145294042 cgR_r04 - 16S ribosomal RNA
1022654 1024148 + 1495 145294042 cgR_r05 - 23S ribosomal RNA
1024258 1025711 + 1454 145294042 cgR_r05 - 23S ribosomal RNA
1025835 1025955 + 121 145294042 cgR_r06 - 5S ribosomal RNA
1061777 1061852 - 76 145294042 cgR_t22 - 11 Arg tRNA
1168215 1168286 - 72 145294042 cgR_t23 -
1188487 1188563 + 77 145294042 cgR_t24 - 15 Leu tRNA
1379041 1379113 - 73 145294042 cgR_t25 - 11 Arg tRNA
1509288 1509359 + 72 145294042 cgR_t26 - 05 Gln tRNA
1509398 1509470 + 73 145294042 cgR_t27 - 04 Glu tRNA
1509537 1509608 + 72 145294042 cgR_t28 - 05 Gln tRNA
1509647 1509719 + 73 145294042 cgR_t29 - 04 Glu tRNA
1511270 1511345 + 76 145294042 cgR_t30 - 04 Glu tRNA
1557374 1557450 - 77 145294042 cgR_t31 - 15 Leu tRNA
1623746 1625283 + 1538 145294042 cgR_r07 - 16S ribosomal RNA
1625682 1627177 + 1496 145294042 cgR_r08 - 23S ribosomal RNA
1627210 1628740 + 1531 145294042 cgR_r08 - 23S ribosomal RNA
1628866 1628987 + 122 145294042 cgR_r09 - 5S ribosomal RNA
1659569 1659645 - 77 145294042 cgR_t32 - 03 Pro tRNA
1751812 1751897 + 86 145294042 cgR_t33 - 15 Leu tRNA
1751984 1752069 + 86 145294042 cgR_t34 - 15 Leu tRNA
1914070 1914145 - 76 145294042 cgR_t35 - 01 Gly tRNA
1914179 1914253 - 75 145294042 cgR_t36 - 13 Val tRNA
1914287 1914359 - 73 145294042 cgR_t37 - 01 Gly tRNA
1914707 1914781 + 75 145294042 cgR_t38 - 13 Val tRNA
2108803 2108880 - 78 145294042 cgR_t39 - 15 Leu tRNA
2339688 2339763 - 76 145294042 cgR_t40 - 13 Val tRNA
2357091 2357167 - 77 145294042 cgR_t41 - 16 Met tRNA
2358949 2359024 + 76 145294042 cgR_t42 - 07 Asn tRNA
2359160 2359235 + 76 145294042 cgR_t43 - 07 Asn tRNA
2544699 2544772 - 74 145294042 cgR_t44 - 03 Pro tRNA
2547077 2547151 - 75 145294042 cgR_t45 - 01 Gly tRNA
2596081 2596157 + 77 145294042 cgR_t46 - 11 Arg tRNA
2598018 2598093 + 76 145294042 cgR_t47 - 09 His tRNA
2623362 2623437 + 76 145294042 cgR_t48 - 10 Lys tRNA
2623525 2623597 + 73 145294042 cgR_t49 - 10 Lys tRNA
2654519 2654603 - 85 145294042 cgR_t50 - 15 Leu tRNA
2687026 2687101 - 76 145294042 cgR_t51 - 02 Ala tRNA
2698051 2698171 - 121 145294042 cgR_r10 - 5S ribosomal RNA
2698297 2699750 - 1454 145294042 cgR_r11 - 23S ribosomal RNA
2699860 2701355 - 1496 145294042 cgR_r11 - 23S ribosomal RNA
2701757 2703291 - 1535 145294042 cgR_r12 - 16S ribosomal RNA
2711621 2711741 - 121 145294042 cgR_r13 - 5S ribosomal RNA
2711867 2713320 - 1454 145294042 cgR_r14 - 23S ribosomal RNA
2713430 2714925 - 1496 145294042 cgR_r14 - 23S ribosomal RNA
2715327 2716861 - 1535 145294042 cgR_r15 - 16S ribosomal RNA
2723166 2723241 - 76 145294042 cgR_t52 - 17 Phe tRNA
2723274 2723347 - 74 145294042 cgR_t53 - 06 Asp tRNA
2726071 2726144 - 74 145294042 cgR_t54 - 06 Asp tRNA
2726183 2726258 - 76 145294042 cgR_t55 - 04 Glu tRNA
2728128 2728200 - 73 145294042 cgR_t56 - 10 Lys tRNA
2794915 2794990 - 76 145294042 cgR_t57 - 12 Thr tRNA
3031337 3031410 + 74 145294042 cgR_t58 - 01 Gly tRNA
3171880 3172000 - 121 145294042 cgR_r16 - 5S ribosomal RNA
3172125 3173578 - 1454 145294042 cgR_r17 - 23S ribosomal RNA
3173688 3175183 - 1496 145294042 cgR_r17 - 23S ribosomal RNA
3175585 3177119 - 1535 145294042 cgR_r18 - 16S ribosomal RNA