Геном прокариот/Материалы:NC 002935
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Базовый уровень статей |
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LOCUS NC_002935 2488635 bp DNA circular BCT 03-DEC-2005
DEFINITION Corynebacterium diphtheriae NCTC 13129, complete genome.
ACCESSION NC_002935
VERSION NC_002935.2 GI:38232642
KEYWORDS complete genome.
SOURCE Corynebacterium diphtheriae NCTC 13129
ORGANISM Corynebacterium diphtheriae NCTC 13129
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
Corynebacterineae; Corynebacteriaceae; Corynebacterium.
REFERENCE 1 (bases 1 to 2488635)
AUTHORS Cerdeno-Tarraga,A.M., Efstratiou,A., Dover,L.G., Holden,M.T.G.,
Pallen,M., Bentley,S.D., Besra,G.S., Churcher,C., James,K.D., De
Zoysa,A., Chillingworth,T., Cronin,A., Dowd,L., Feltwell,T.,
Hamlin,N., Holroyd,S., Jagels,K., Moule,S., Quail,M.A.,
Rabbinowitsch,E., Rutherford,K., Thomson,N.R., Unwin,L.,
Whitehead,S. and Barrell B.G. Parkhill,J.
TITLE The complete genome sequence and analysis of Corynebacterium
diphtheriae NCTC13129
JOURNAL Nucleic Acids Res. 31 (22), 6516-6523 (2003)
PUBMED 14602910
REFERENCE 2 (bases 1 to 2488635)
AUTHORS Cerdeno-Tarraga,A.M.
TITLE Direct Submission
JOURNAL Submitted (03-OCT-2003) Cerdeno-Tarraga A.M., submitted on behalf
of the Pathogen Sequencing Unit, Sanger Institute, Wellcome Trust
Genome Campus, Hinxton, Cambridge CB10 1SA E-mail:
amct@sanger.ac.uk
REFERENCE 3 (bases 1 to 2488635)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BX248353.
On Nov 10, 2003 this sequence version replaced gi:20070482.
COMPLETENESS: full length.
Расположение РНК
править| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 11818 | 11891 | + | 74 | 38232642 | DIPt01 | - | Anticodon: GAT |
| 11904 | 11976 | + | 73 | 38232642 | DIPt02 | - | Anticodon: TGC |
| 19068 | 19141 | + | 74 | 38232642 | DIPt03 | - | Anticodon: GAT |
| 19154 | 19226 | + | 73 | 38232642 | DIPt04 | - | Anticodon: TGC |
| 20221 | 20293 | + | 73 | 38232642 | DIPt05 | - | Anticodon: TGC |
| 53080 | 53163 | + | 84 | 38232642 | DIPt06 | - | Anticodon: CAG |
| 150357 | 150441 | + | 85 | 38232642 | DIPt07 | - | Anticodon: TGA |
| 151769 | 151857 | + | 89 | 38232642 | DIPt08 | - | Anticodon: GCT |
| 151905 | 151977 | + | 73 | 38232642 | DIPt09 | - | Anticodon: ACG |
| 154077 | 154149 | + | 73 | 38232642 | DIPt10 | - | Anticodon: ACG |
| 190709 | 190788 | + | 80 | 38232642 | DIPt11 | - | Anticodon: ACG |
| 210284 | 210371 | + | 88 | 38232642 | DIPt12 | - | Anticodon: CGA |
| 219137 | 219222 | - | 86 | 38232642 | DIPt13 | - | Anticodon: GGA |
| 264680 | 264753 | - | 74 | 38232642 | DIPt14 | - | Anticodon: CGG |
| 305408 | 305480 | + | 73 | 38232642 | DIPt15 | - | Anticodon: CGT |
| 394779 | 394860 | + | 82 | 38232642 | DIPt16 | - | Anticodon: GTA |
| 395053 | 395125 | + | 73 | 38232642 | DIPt17 | - | Anticodon: GGT |
| 395164 | 395235 | + | 72 | 38232642 | DIPt18 | - | Anticodon: CAT |
| 395264 | 395336 | + | 73 | 38232642 | DIPt19 | - | Anticodon: CCA |
| 710975 | 711048 | + | 74 | 38232642 | DIPt20 | - | Anticodon: CAT |
| 743383 | 744774 | + | 1392 | 38232642 | DIP0766.1 | - | 16S ribosomal RNA |
| 745234 | 748318 | + | 3085 | 38232642 | DIPr02 | - | possible 23S ribosomal RNA |
| 748458 | 748578 | + | 121 | 38232642 | DIPr03 | - | 5S ribosomal RNA |
| 795540 | 795612 | - | 73 | 38232642 | DIPt21 | - | Anticodon: CCT |
| 882605 | 882676 | + | 72 | 38232642 | DIPt22 | - | Anticodon: TTG |
| 895059 | 895132 | + | 74 | 38232642 | DIPt23 | - | Anticodon: TAA |
| 1008521 | 1008593 | - | 73 | 38232642 | DIPt24 | - | Anticodon: CCG |
| 1100709 | 1100780 | + | 72 | 38232642 | DIPt25 | - | Anticodon: CTG |
| 1100814 | 1100886 | + | 73 | 38232642 | DIPt26 | - | Anticodon: CTC |
| 1106131 | 1106203 | + | 73 | 38232642 | DIPt27 | - | Anticodon: CTC |
| 1129683 | 1129756 | - | 74 | 38232642 | DIPt28 | - | Anticodon: CAA |
| 1170343 | 1171734 | + | 1392 | 38232642 | DIPr04 | - | 16S ribosomal RNA |
| 1172194 | 1175278 | + | 3085 | 38232642 | DIPr05 | - | possible 23S ribosomal RNA |
| 1175418 | 1175538 | + | 121 | 38232642 | DIPr06 | - | 5S ribosomal RNA |
| 1201374 | 1201447 | + | 74 | 38232642 | DIPt29 | - | Anticodon: GGG |
| 1273184 | 1273269 | + | 86 | 38232642 | DIPt30 | - | Anticodon: GAG |
| 1409586 | 1409657 | - | 72 | 38232642 | DIPt31 | - | Anticodon: CAC |
| 1409946 | 1410018 | + | 73 | 38232642 | DIPt32 | - | Anticodon: GCC |
| 1410036 | 1410107 | + | 72 | 38232642 | DIPt33 | - | Anticodon: GAC |
| 1410141 | 1410213 | + | 73 | 38232642 | DIPt34 | - | Anticodon: GCC |
| 1410252 | 1410322 | + | 71 | 38232642 | DIPt35 | - | Anticodon: GCA |
| 1410330 | 1410401 | + | 72 | 38232642 | DIPt36 | - | Anticodon: GAC |
| 1410435 | 1410507 | + | 73 | 38232642 | DIPt37 | - | Anticodon: GCC |
| 1722455 | 1722527 | - | 73 | 38232642 | DIPt38 | - | Anticodon: TAC |
| 1734689 | 1734761 | - | 73 | 38232642 | DIPt39 | - | Anticodon: GTT |
| 1734940 | 1735013 | + | 74 | 38232642 | DIPt40 | - | Anticodon: CAT |
| 1842304 | 1842377 | - | 74 | 38232642 | DIPt41 | - | Anticodon: TGG |
| 1842721 | 1842792 | - | 72 | 38232642 | DIPt42 | - | Anticodon: TCC |
| 1861148 | 1861221 | - | 74 | 38232642 | DIPt43 | - | Anticodon: TCT |
| 1863910 | 1863982 | + | 73 | 38232642 | DIPt44 | - | Anticodon: GTG |
| 1866327 | 1866399 | + | 73 | 38232642 | DIPt45 | - | Anticodon: CTT |
| 1893990 | 1894071 | - | 82 | 38232642 | DIPt46 | - | Anticodon: TAG |
| 1923546 | 1923618 | - | 73 | 38232642 | DIPt47 | - | Anticodon: GGC |
| 1931339 | 1931459 | - | 121 | 38232642 | DIPr07 | - | 5S ribosomal RNA |
| 1931599 | 1934685 | - | 3087 | 38232642 | DIPr08 | - | possible 23S ribosomal RNA |
| 1935145 | 1936536 | - | 1392 | 38232642 | DIPr09 | - | 16S ribosomal RNA |
| 1942583 | 1942655 | - | 73 | 38232642 | DIPt48 | - | Anticodon: GAA |
| 1942678 | 1942751 | - | 74 | 38232642 | DIPt49 | - | Anticodon: GTC |
| 1944118 | 1944191 | - | 74 | 38232642 | DIPt50 | - | Anticodon: GTC |
| 1944221 | 1944293 | - | 73 | 38232642 | DIPt51 | - | Anticodon: TTC |
| 1950154 | 1950226 | - | 73 | 38232642 | DIPt52 | - | Anticodon: TTT |
| 2011963 | 2012035 | - | 73 | 38232642 | DIPt53 | - | Anticodon: TGT |
| 2184694 | 2184814 | - | 121 | 38232642 | DIPr10 | - | 5S ribosomal RNA |
| 2184953 | 2188037 | - | 3085 | 38232642 | DIPr11 | - | possible 23S ribosomal RNA |
| 2188497 | 2189888 | - | 1392 | 38232642 | DIPr12 | - | 16S ribosomal RNA |
| 2209315 | 2209385 | + | 71 | 38232642 | DIPt54 | - | Anticodon: CCC |
| 2369527 | 2369647 | - | 121 | 38232642 | DIPr13 | - | 5S ribosomal RNA |
| 2369786 | 2372870 | - | 3085 | 38232642 | DIPr14 | - | possible 23S ribosomal RNA |
| 2373330 | 2374721 | - | 1392 | 38232642 | DIPr15 | - | 16S ribosomal RNA |