Геном прокариот/Материалы:NC 002936

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_002936            1469720 bp    DNA     circular BCT 03-APR-2006
   DEFINITION  Dehalococcoides ethenogenes 195, complete genome.
   ACCESSION   NC_002936
   VERSION     NC_002936.3  GI:57233530
   KEYWORDS    .
   SOURCE      Dehalococcoides ethenogenes 195
     ORGANISM  Dehalococcoides ethenogenes 195
               Bacteria; Chloroflexi; Dehalococcoidetes; Dehalococcoides.
   REFERENCE   1  (bases 1 to 1469720)
     AUTHORS   Seshadri,R., Adrian,L., Fouts,D.E., Eisen,J.A., Phillippy,A.M.,
               Methe,B.A., Ward,N.L., Nelson,W.C., Deboy,R.T., Khouri,H.M.,
               Kolonay,J.F., Dodson,R.J., Daugherty,S.C., Brinkac,L.M.,
               Sullivan,S.A., Madupu,R., Nelson,K.E., Kang,K.H., Impraim,M.,
               Tran,K., Robinson,J.M., Forberger,H.A., Fraser,C.M., Zinder,S.H.
               and Heidelberg,J.F.
     TITLE     Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides
               ethenogenes
     JOURNAL   Science 307 (5706), 105-108 (2005)
      PUBMED   15637277
   REFERENCE   2  (bases 1 to 1469720)
     AUTHORS   Seshadri,R., Adrian,L., Fouts,D.E., Eisen,J.A., Phillippy,A.M.,
               Methe,B.A., Ward,N.L., Nelson,W.C., DeBoy,R.T., Khouri,H.M.,
               Kolonay,J., Dodson,R.J., Daugherty,S.C., Brinkac,L., Sullivan,S.A.,
               Madupu,R., Nelson,K.E., Kang,K.H., Impraim,M., Tran,K.,
               Robinson,J.M., Forberger,H.A., Fraser,C.M., Zinder,S.H. and
               Heidelberg,J.F.
     TITLE     Direct Submission
     JOURNAL   Submitted (19-OCT-2004) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   REFERENCE   3  (bases 1 to 1469720)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000027.
               On Jan 7, 2005 this sequence version replaced gi:22550416.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
47719	50667	+	2949	57233530	DET_De23S	-	23S ribosomal RNA
50767	50889	+	123	57233530	DET_De5S	-	5S ribosomal RNA
57782	57857	+	76	57233530	DET_tRNA-Ala-1	-	^{02 Ala tRNA}
149037	149112	+	76	57233530	DET_tRNA-Val-1	-	^{13 Val tRNA}
308964	309039	-	76	57233530	DET_tRNA-Ala-2	-	^{02 Ala tRNA}
342947	343207	+	261	57233530	DET_DernpB1	-	sRNA
364688	364762	+	75	57233530	DET_tRNA-Thr-1	-	^{12 Thr tRNA}
396447	396522	-	76	57233530	DET_tRNA-Met-1	-	^{16 Met tRNA}
527290	527379	-	90	57233530	DET_tRNA-Ser-1	-	^{08 Ser tRNA}
666312	666401	-	90	57233530	DET_tRNA-Ser-2	-	^{08 Ser tRNA}
666436	666525	-	90	57233530	DET_tRNA-Ser-3	-	^{08 Ser tRNA}
668207	668278	+	72	57233530	DET_tRNA-Arg-1	-	^{11 Arg tRNA}
674395	674472	+	78	57233530	DET_tRNA-Pro-1	-	^{03 Pro tRNA}
676389	676463	-	75	57233530	DET_tRNA-Gly-1	-	^{01 Gly tRNA}
677016	677090	+	75	57233530	DET_tRNA-Met-2	-	^{16 Met tRNA}
689105	689181	+	77	57233530	DET_tRNA-Arg-2	-	^{11 Arg tRNA}
698661	698745	-	85	57233530	DET_tRNA-Leu-1	-	^{15 Leu tRNA}
701192	701268	+	77	57233530	DET_tRNA-Pro-2	-	^{03 Pro tRNA}
740686	740761	+	76	57233530	DET_tRNA-Phe-1	-	^{17 Phe tRNA}
740836	740922	+	87	57233530	DET_tRNA-Leu-2	-	^{15 Leu tRNA}
740952	741025	+	74	57233530	DET_tRNA-Gln-1	-	^{05 Gln tRNA}
741036	741110	+	75	57233530	DET_tRNA-Asn-1	-	^{07 Asn tRNA}
748011	748083	-	73	57233530	DET_tRNA-Lys-1	-	^{10 Lys tRNA}
781966	782040	+	75	57233530	DET_tRNA-Gly-2	-	^{01 Gly tRNA}
832857	832929	-	73	57233530	DET_tRNA-Lys-2	-	^{10 Lys tRNA}
877642	877717	-	76	57233530	DET_tRNA-Arg-3	-	^{11 Arg tRNA}
877734	877809	-	76	57233530	DET_tRNA-His-1	-	^{09 His tRNA}
913341	913416	-	76	57233530	DET_tRNA-Thr-2	-	^{12 Thr tRNA}
913479	913562	-	84	57233530	DET_tRNA-Tyr-1	-	^{18 Tyr tRNA}
913603	913675	-	73	57233530	DET_tRNA-Thr-3	-	^{12 Thr tRNA}
928040	928116	-	77	57233530	DET_tRNA-Ile-1	-	^{14 Ile tRNA}
928439	929873	-	1435	57233530	DET_De16S	-	16S ribosomal RNA
930500	930576	-	77	57233530	DET_tRNA-Glu-1	-	^{04 Glu tRNA}
930590	930663	-	74	57233530	DET_tRNA-Gln-2	-	^{05 Gln tRNA}
950330	950406	+	77	57233530	DET_tRNA-Asp-1	-	^{06 Asp tRNA}
1081649	1081725	-	77	57233530	DET_tRNA-Val-2	-	^{13 Val tRNA}
1197631	1197705	+	75	57233530	DET_tRNA-Met-3	-	^{16 Met tRNA}
1254883	1254974	-	92	57233530	DET_tRNA-Ser-4	-	^{08 Ser tRNA}
1308255	1308331	+	77	57233530	DET_tRNA-Trp-1	-	^{20 Trp tRNA}
1308337	1308423	+	87	57233530	DET_tRNA-Leu-3	-	^{15 Leu tRNA}
1308437	1308511	+	75	57233530	DET_tRNA-Gly-3	-	^{01 Gly tRNA}
1308549	1308623	+	75	57233530	DET_tRNA-Cys-1	-	^{19 Cys tRNA}
1309338	1309422	+	85	57233530	DET_tRNA-Leu-4	-	^{15 Leu tRNA}
1325203	1325289	+	87	57233530	DET_tRNA-Leu-5	-	^{15 Leu tRNA}
1325295	1325372	+	78	57233530	DET_tRNA-Arg-4	-	^{11 Arg tRNA}
1325383	1325459	+	77	57233530	DET_tRNA-Val-3	-	^{13 Val tRNA}
1361697	1362048	+	352	57233530	DET_DetmRNA1	-	sRNA
1398120	1398195	+	76	57233530	DET_tRNA-Ala-3	-	^{02 Ala tRNA}
1423580	1423656	+	77	57233530	DET_tRNA-Arg-5	-	^{11 Arg tRNA}
1452980	1453055	-	76	57233530	DET_tRNA-Glu-2	-	^{04 Glu tRNA}
1465309	1465386	+	78	57233530	DET_tRNA-Pro-3	-	^{03 Pro tRNA}