Геном прокариот/Материалы:NC 004116

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_004116            2160267 bp    DNA     circular BCT 20-JUN-2007
   DEFINITION  Streptococcus agalactiae 2603V/R, complete genome.
   ACCESSION   NC_004116
   VERSION     NC_004116.1  GI:22536185
   KEYWORDS    .
   SOURCE      Streptococcus agalactiae 2603V/R
     ORGANISM  Streptococcus agalactiae 2603V/R
               Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;
               Streptococcus.
   REFERENCE   1  (bases 1 to 2160267)
     AUTHORS   Tettelin,H., Masignani,V., Cieslewicz,M.J., Eisen,J.A.,
               Peterson,S., Wessels,M.R., Paulsen,I.T., Nelson,K.E., Margarit,I.,
               Read,T.D., Madoff,L.C., Wolf,A.M., Beanan,M.J., Brinkac,L.M.,
               Daugherty,S.C., DeBoy,R.T., Durkin,A.S., Kolonay,J.F., Madupu,R.,
               Lewis,M.R., Radune,D., Fedorova,N.B., Scanlan,D., Khouri,H.,
               Mulligan,S., Carty,H.A., Cline,R.T., Van Aken,S.E., Gill,J.,
               Scarselli,M., Mora,M., Iacobini,E.T., Brettoni,C., Galli,G.,
               Mariani,M., Vegni,F., Maione,D., Rinaudo,D., Rappuoli,R.,
               Telford,J.L., Kasper,D.L., Grandi,G. and Fraser,C.M.
     TITLE     Complete genome sequence and comparative genomic analysis of an
               emerging human pathogen, serotype V Streptococcus agalactiae
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (19), 12391-12396 (2002)
      PUBMED   12200547
   REFERENCE   2  (bases 1 to 2160267)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2160267)
     AUTHORS   Tettelin,H., Masignani,V., Cieslewicz,M.J., Eisen,J.A.,
               Peterson,S., Wessels,M.R., Paulsen,I.T., Nelson,K.E., Margarit,I.,
               Read,T.D., Madoff,L.C., Wolf,A.M., Beanan,M.J., Brinkac,L.M.,
               Daugherty,S.C., DeBoy,R.T., Durkin,S., Kolonay,J.F., Umayam,L.A.,
               Madupu,R., Lewis,M.R., Radune,D., Fedorova,N.B., Scanlan,D.,
               Khouri,H., Mulligan,S., Carty,H.A., Cline,R.T., Gill,J.,
               Scarselli,M., Mora,M., Iacobini,E.T., Brettoni,C., Galli,G.,
               Mariani,M., Vegni,F., Maione,D., Rinaudo,D., Rappuoli,R.,
               Telford,J.L., Kasper,D.L., Grandi,G. and Fraser,C.M.
     TITLE     Direct Submission
     JOURNAL   Submitted (18-JUL-2002) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE009948.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
16404	17954	+	1551	22536185	Sa16SA	-	16S ribosomal RNA
18007	18079	+	73	22536185	tRNA-Ala-2	-	^{02 Ala tRNA}
18234	21136	+	2903	22536185	Sa23SA	-	23S ribosomal RNA
21210	21326	+	117	22536185	SAG_r01	-	5S ribosomal RNA
21330	21402	+	73	22536185	tRNA-Val-1	-	^{13 Val tRNA}
21405	21477	+	73	22536185	tRNA-Asp-1	-	^{06 Asp tRNA}
21480	21552	+	73	22536185	tRNA-Lys-2	-	^{10 Lys tRNA}
21562	21643	+	82	22536185	tRNA-Leu-1	-	^{15 Leu tRNA}
21654	21726	+	73	22536185	tRNA-Thr-1	-	^{12 Thr tRNA}
21760	21831	+	72	22536185	tRNA-Gly-1	-	^{01 Gly tRNA}
21840	21924	+	85	22536185	tRNA-Leu-2	-	^{15 Leu tRNA}
21936	22009	+	74	22536185	tRNA-Arg-3	-	^{11 Arg tRNA}
22017	22090	+	74	22536185	tRNA-Pro-1	-	^{03 Pro tRNA}
22235	23785	+	1551	22536185	Sa16SB	-	16S ribosomal RNA
23838	23910	+	73	22536185	tRNA-Ala-3	-	^{02 Ala tRNA}
24065	26967	+	2903	22536185	Sa23SB	-	23S ribosomal RNA
27041	27157	+	117	22536185	SAG_r02	-	5S ribosomal RNA
27161	27233	+	73	22536185	tRNA-Val-2	-	^{13 Val tRNA}
27236	27308	+	73	22536185	tRNA-Asp-2	-	^{06 Asp tRNA}
27311	27383	+	73	22536185	tRNA-Lys-3	-	^{10 Lys tRNA}
27393	27474	+	82	22536185	tRNA-Leu-3	-	^{15 Leu tRNA}
27485	27557	+	73	22536185	tRNA-Thr-2	-	^{12 Thr tRNA}
27591	27662	+	72	22536185	tRNA-Gly-2	-	^{01 Gly tRNA}
27671	27755	+	85	22536185	tRNA-Leu-4	-	^{15 Leu tRNA}
27767	27840	+	74	22536185	tRNA-Arg-4	-	^{11 Arg tRNA}
27848	27921	+	74	22536185	tRNA-Pro-2	-	^{03 Pro tRNA}
27937	28010	+	74	22536185	tRNA-Met-1	-	^{16 Met tRNA}
28030	28103	+	74	22536185	tRNA-Met-2	-	^{16 Met tRNA}
28119	28208	+	90	22536185	tRNA-Ser-1	-	^{08 Ser tRNA}
28219	28292	+	74	22536185	tRNA-Met-3	-	^{16 Met tRNA}
28295	28367	+	73	22536185	tRNA-Phe-1	-	^{17 Phe tRNA}
28387	28457	+	71	22536185	tRNA-Gly-3	-	^{01 Gly tRNA}
28492	28565	+	74	22536185	tRNA-Ile-1	-	^{14 Ile tRNA}
28579	28666	+	88	22536185	tRNA-Ser-2	-	^{08 Ser tRNA}
91212	92762	+	1551	22536185	Sa16SC	-	16S ribosomal RNA
92815	92887	+	73	22536185	tRNA-Ala-7	-	^{02 Ala tRNA}
93042	95944	+	2903	22536185	Sa23SC	-	23S ribosomal RNA
96018	96134	+	117	22536185	SAG_r03	-	5S ribosomal RNA
96138	96210	+	73	22536185	tRNA-Val-5	-	^{13 Val tRNA}
96213	96285	+	73	22536185	tRNA-Asp-3	-	^{06 Asp tRNA}
96288	96360	+	73	22536185	tRNA-Lys-4	-	^{10 Lys tRNA}
96370	96451	+	82	22536185	tRNA-Leu-6	-	^{15 Leu tRNA}
96462	96534	+	73	22536185	tRNA-Thr-4	-	^{12 Thr tRNA}
96563	96639	+	77	22536185	tRNA-Ile-4	-	^{14 Ile tRNA}
96647	96718	+	72	22536185	tRNA-Glu-5	-	^{04 Glu tRNA}
96732	96821	+	90	22536185	tRNA-Ser-5	-	^{08 Ser tRNA}
96832	96905	+	74	22536185	tRNA-Met-5	-	^{16 Met tRNA}
96908	96980	+	73	22536185	tRNA-Phe-3	-	^{17 Phe tRNA}
96992	97072	+	81	22536185	tRNA-Tyr-3	-	^{18 Tyr tRNA}
97079	97149	+	71	22536185	tRNA-Trp-2	-	^{20 Trp tRNA}
97164	97236	+	73	22536185	tRNA-His-2	-	^{09 His tRNA}
97243	97314	+	72	22536185	tRNA-Gln-4	-	^{05 Gln tRNA}
97325	97408	+	84	22536185	tRNA-Leu-7	-	^{15 Leu tRNA}
118606	118691	+	86	22536185	tRNA-Leu-8	-	^{15 Leu tRNA}
165241	166791	+	1551	22536185	Sa16SD	-	16S ribosomal RNA
166844	166916	+	73	22536185	tRNA-Ala-1	-	^{02 Ala tRNA}
167071	169973	+	2903	22536185	Sa23SD	-	23S ribosomal RNA
170047	170163	+	117	22536185	Sa5SD	-	5S ribosomal RNA
170169	170242	+	74	22536185	tRNA-Asn-1	-	^{07 Asn tRNA}
250368	251918	+	1551	22536185	Sa16SE	-	16S ribosomal RNA
251971	252043	+	73	22536185	tRNA-Ala-4	-	^{02 Ala tRNA}
252198	255100	+	2903	22536185	Sa23SE	-	23S ribosomal RNA
255174	255290	+	117	22536185	SAG_r04	-	5S ribosomal RNA
255294	255366	+	73	22536185	tRNA-Val-3	-	^{13 Val tRNA}
255372	255442	+	71	22536185	tRNA-Gly-4	-	^{01 Gly tRNA}
255479	255555	+	77	22536185	tRNA-Ile-2	-	^{14 Ile tRNA}
255563	255634	+	72	22536185	tRNA-Glu-3	-	^{04 Glu tRNA}
255648	255737	+	90	22536185	tRNA-Ser-3	-	^{08 Ser tRNA}
255748	255821	+	74	22536185	tRNA-Met-4	-	^{16 Met tRNA}
255824	255896	+	73	22536185	tRNA-Phe-2	-	^{17 Phe tRNA}
255908	255988	+	81	22536185	tRNA-Tyr-2	-	^{18 Tyr tRNA}
255995	256065	+	71	22536185	tRNA-Trp-1	-	^{20 Trp tRNA}
256080	256152	+	73	22536185	tRNA-His-1	-	^{09 His tRNA}
256159	256230	+	72	22536185	tRNA-Gln-3	-	^{05 Gln tRNA}
256241	256324	+	84	22536185	tRNA-Leu-5	-	^{15 Leu tRNA}
348575	350125	+	1551	22536185	Sa16SF	-	16S ribosomal RNA
350178	350250	+	73	22536185	tRNA-Ala-5	-	^{02 Ala tRNA}
350405	353307	+	2903	22536185	Sa23SF	-	23S ribosomal RNA
353381	353497	+	117	22536185	Sa5SF	-	5S ribosomal RNA
353503	353576	+	74	22536185	tRNA-Asn-3	-	^{07 Asn tRNA}
385359	385446	+	88	22536185	tRNA-Ser-4	-	^{08 Ser tRNA}
417719	419269	+	1551	22536185	Sa16SG	-	16S ribosomal RNA
419322	419394	+	73	22536185	tRNA-Ala-6	-	^{02 Ala tRNA}
419549	422451	+	2903	22536185	Sa23SG	-	23S ribosomal RNA
422525	422641	+	117	22536185	SAG_r05	-	5S ribosomal RNA
422645	422717	+	73	22536185	tRNA-Val-4	-	^{13 Val tRNA}
422723	422793	+	71	22536185	tRNA-Gly-5	-	^{01 Gly tRNA}
422830	422906	+	77	22536185	tRNA-Ile-3	-	^{14 Ile tRNA}
422914	422985	+	72	22536185	tRNA-Glu-4	-	^{04 Glu tRNA}
454477	454547	-	71	22536185	tRNA-Thr-3	-	^{12 Thr tRNA}
558712	558783	+	72	22536185	tRNA-Arg-5	-	^{11 Arg tRNA}
1152666	1152737	-	72	22536185	tRNA-Arg-1	-	^{11 Arg tRNA}
1154135	1154209	-	75	22536185	tRNA-Gln-1	-	^{05 Gln tRNA}
1154215	1154295	-	81	22536185	tRNA-Tyr-1	-	^{18 Tyr tRNA}
1366792	1366863	-	72	22536185	tRNA-Glu-1	-	^{04 Glu tRNA}
1366872	1366943	-	72	22536185	tRNA-Gln-2	-	^{05 Gln tRNA}
1833034	1833104	+	71	22536185	tRNA-Cys-1	-	^{19 Cys tRNA}
1962163	1962235	+	73	22536185	tRNA-Lys-1	-	^{10 Lys tRNA}
2156879	2156952	-	74	22536185	tRNA-Asn-2	-	^{07 Asn tRNA}
2156982	2157053	-	72	22536185	tRNA-Glu-2	-	^{04 Glu tRNA}
2157245	2157318	+	74	22536185	tRNA-Arg-2	-	^{11 Arg tRNA}