Геном прокариот/Материалы:NC 004663

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_004663            6260361 bp    DNA     circular BCT 14-SEP-2007
   DEFINITION  Bacteroides thetaiotaomicron VPI-5482, complete genome.
   ACCESSION   NC_004663
   VERSION     NC_004663.1  GI:29345410
   KEYWORDS    .
   SOURCE      Bacteroides thetaiotaomicron VPI-5482
     ORGANISM  Bacteroides thetaiotaomicron VPI-5482
               Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;
               Bacteroidaceae; Bacteroides.
   REFERENCE   1  (bases 1 to 6260361)
     AUTHORS   Xu,J., Bjursell,M.K., Himrod,J., Deng,S., Carmichael,L.K.,
               Chiang,H.C., Hooper,L.V. and Gordon,J.I.
     TITLE     A Genomic View of the Human-Bacteroides thetaiotaomicron Symbiosis
     JOURNAL   Science 299 (5615), 2074-2076 (2003)
      PUBMED   12663928
   REFERENCE   2  (bases 1 to 6260361)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (28-MAR-2003) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 6260361)
     AUTHORS   Xu,J., Bjursell,M.K., Himrod,J., Deng,S., Carmichael,L.K.,
               Chiang,H.C., Hooper,L.V. and Gordon,J.I.
     TITLE     Direct Submission
     JOURNAL   Submitted (31-OCT-2002) Department of Molecular Biology and
               Pharmacology, Washington University in St. Louis, 660 S. Euclid,
               St. Louis, MO 63110, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE015928.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
111386	111473	+	88	29345410	BT_t01	-	^{08 Ser tRNA}
520217	520289	-	73	29345410	BT_t02	-	^{12 Thr tRNA}
835573	835645	+	73	29345410	BT_t03	-	^{01 Gly tRNA}
835680	835764	+	85	29345410	BT_t04	-	^{15 Leu tRNA}
835786	835869	+	84	29345410	BT_t05	-	^{15 Leu tRNA}
835888	835960	+	73	29345410	BT_t06	-	^{01 Gly tRNA}
835993	836077	+	85	29345410	BT_t07	-	^{15 Leu tRNA}
836113	836188	+	76	29345410	BT_t08	-	^{01 Gly tRNA}
951833	951906	+	74	29345410	BT_t09	-	^{11 Arg tRNA}
1015955	1016030	+	76	29345410	BT_t10	-	^{10 Lys tRNA}
1016059	1016134	+	76	29345410	BT_t11	-	^{10 Lys tRNA}
1041339	1041416	-	78	29345410	BT_t12	-	^{03 Pro tRNA}
1041448	1041525	-	78	29345410	BT_t13	-	^{03 Pro tRNA}
1099844	1099920	-	77	29345410	BT_t14	-	^{11 Arg tRNA}
1099941	1100014	-	74	29345410	BT_t15	-	^{11 Arg tRNA}
1100035	1100108	-	74	29345410	BT_t16	-	^{11 Arg tRNA}
1144682	1144760	-	79	29345410	BT_t17	-	Xaa tRNA
1163463	1163535	-	73	29345410	BT_t18	-	^{01 Gly tRNA}
1363731	1363804	-	74	29345410	BT_t19	-	^{06 Asp tRNA}
1483219	1483291	+	73	29345410	BT_t20	-	^{10 Lys tRNA}
1534143	1534232	+	90	29345410	BT_t21	-	^{08 Ser tRNA}
1534296	1534367	+	72	29345410	BT_t22	-	^{04 Glu tRNA}
1626552	1626585	-	34	29345410	BT_r01	-	5S ribosomal RNA
1626942	1629594	-	2653	29345410	BT_r02	-	23S ribosomal RNA
1629769	1629842	-	74	29345410	BT_t23	-	^{02 Ala tRNA}
1629897	1629970	-	74	29345410	BT_t24	-	^{14 Ile tRNA}
1630184	1631563	-	1380	29345410	BT_r03	-	16S ribosomal RNA
1709813	1709886	+	74	29345410	BT_t25	-	^{06 Asp tRNA}
1709940	1710013	+	74	29345410	BT_t26	-	^{06 Asp tRNA}
1946747	1946820	+	74	29345410	BT_t27	-	^{12 Thr tRNA}
1955593	1955664	-	72	29345410	BT_t28	-	^{19 Cys tRNA}
1980662	1980740	+	79	29345410	BT_t29	-	^{09 His tRNA}
2058727	2058803	+	77	29345410	BT_t30	-	^{02 Ala tRNA}
2337015	2337048	-	34	29345410	BT_r04	-	5S ribosomal RNA
2337467	2340119	-	2653	29345410	BT_r05	-	23S ribosomal RNA
2340294	2340367	-	74	29345410	BT_t31	-	^{02 Ala tRNA}
2340422	2340495	-	74	29345410	BT_t32	-	^{14 Ile tRNA}
2340709	2342191	-	1483	29345410	BT_r06	-	16S ribosomal RNA
2370156	2370231	+	76	29345410	BT_t33	-	^{17 Phe tRNA}
2575512	2575599	-	88	29345410	BT_t34	-	^{08 Ser tRNA}
2680617	2680689	-	73	29345410	BT_t35	-	^{11 Arg tRNA}
2857505	2857577	+	73	29345410	BT_t36	-	^{10 Lys tRNA}
3020708	3020781	+	74	29345410	BT_t37	-	^{16 Met tRNA}
3031020	3031053	-	34	29345410	BT_r07	-	5S ribosomal RNA
3031472	3034124	-	2653	29345410	BT_r08	-	23S ribosomal RNA
3034299	3034372	-	74	29345410	BT_t38	-	^{02 Ala tRNA}
3034427	3034500	-	74	29345410	BT_t39	-	^{14 Ile tRNA}
3034714	3036195	-	1482	29345410	BT_r09	-	16S ribosomal RNA
3214407	3214482	+	76	29345410	BT_t40	-	^{17 Phe tRNA}
3316905	3316980	+	76	29345410	BT_t41	-	^{03 Pro tRNA}
3325270	3325303	-	34	29345410	BT_r10	-	5S ribosomal RNA
3325722	3328375	-	2654	29345410	BT_r11	-	23S ribosomal RNA
3328550	3328623	-	74	29345410	BT_t42	-	^{02 Ala tRNA}
3328678	3328751	-	74	29345410	BT_t43	-	^{14 Ile tRNA}
3328965	3330446	-	1482	29345410	BT_r12	-	16S ribosomal RNA
3393792	3393867	-	76	29345410	BT_t44	-	^{20 Trp tRNA}
3395157	3395228	-	72	29345410	BT_t45	-	^{12 Thr tRNA}
3395241	3395313	-	73	29345410	BT_t46	-	^{01 Gly tRNA}
3395339	3395424	-	86	29345410	BT_t47	-	^{18 Tyr tRNA}
3395580	3395656	-	77	29345410	BT_t48	-	^{12 Thr tRNA}
3448642	3448728	-	87	29345410	BT_t49	-	^{15 Leu tRNA}
3474693	3474769	+	77	29345410	BT_t50	-	^{07 Asn tRNA}
3474794	3474870	+	77	29345410	BT_t51	-	^{07 Asn tRNA}
3537572	3537646	-	75	29345410	BT_t52	-	^{11 Arg tRNA}
3757436	3757512	+	77	29345410	BT_t53	-	^{16 Met tRNA}
4120754	4120827	+	74	29345410	BT_t54	-	^{05 Gln tRNA}
4420770	4420844	-	75	29345410	BT_t55	-	^{04 Glu tRNA}
4629775	4629856	-	82	29345410	BT_t56	-	^{15 Leu tRNA}
4844016	4844088	+	73	29345410	BT_t57	-	^{01 Gly tRNA}
4844103	4844189	+	87	29345410	BT_t58	-	^{15 Leu tRNA}
4890894	4890966	-	73	29345410	BT_t59	-	^{16 Met tRNA}
4983424	4984906	+	1483	29345410	BT_r13	-	16S ribosomal RNA
4985120	4985193	+	74	29345410	BT_t60	-	^{14 Ile tRNA}
4985248	4985321	+	74	29345410	BT_t61	-	^{02 Ala tRNA}
4985496	4988149	+	2654	29345410	BT_r14	-	23S ribosomal RNA
4988506	4988539	+	34	29345410	BT_r15	-	5S ribosomal RNA
5043396	5043473	+	78	29345410	BT_t62	-	^{13 Val tRNA}
5043503	5043580	+	78	29345410	BT_t63	-	^{13 Val tRNA}
5174492	5174568	-	77	29345410	BT_t64	-	^{03 Pro tRNA}
5222604	5222677	+	74	29345410	BT_t65	-	^{05 Gln tRNA}
5604544	5604616	-	73	29345410	BT_t66	-	^{01 Gly tRNA}
5604622	5604707	-	86	29345410	BT_t67	-	^{18 Tyr tRNA}
5877796	5877871	-	76	29345410	BT_t68	-	^{20 Trp tRNA}
5986401	5986474	+	74	29345410	BT_t69	-	^{12 Thr tRNA}
6138247	6138331	+	85	29345410	BT_t70	-	^{08 Ser tRNA}
6217154	6217238	+	85	29345410	BT_t71	-	^{08 Ser tRNA}