Геном прокариот/Материалы:NC 004668

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_004668            3218031 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Enterococcus faecalis V583, complete genome.
   ACCESSION   NC_004668
   VERSION     NC_004668.1  GI:29374661
   KEYWORDS    .
   SOURCE      Enterococcus faecalis V583
     ORGANISM  Enterococcus faecalis V583
               Bacteria; Firmicutes; Lactobacillales; Enterococcaceae;
               Enterococcus.
   REFERENCE   1  (bases 1 to 3218031)
     AUTHORS   Paulsen,I., Banerjei,L., Myers,G.S.A., Nelson,K.E., Seshadri,R.,
               Read,T.D., Fouts,D.E., Eisen,J.A., Gill,S.R., Heidelberg,J.F.,
               Tettelin,H., Dodson,R.J., Umayam,L., Brinkac,L., Beanan,M.,
               Daugherty,S., DeBoy,R.T., Durkin,S., Kolonay,J., Madupu,R.,
               Nelson,W., Vamathevan,J., Tran,B., Upton,J., Hansen,T., Shetty,J.,
               Khouri,H., Utterback,T., Radune,D., Ketchum,K.A., Dougherty,B.A.
               and Fraser,C.M.
     TITLE     Role of Mobile DNA in the Evolution of Vancomycin-Resistant
               Enterococcus faecalis
     JOURNAL   Science 299 (5615), 2071-2074 (2003)
      PUBMED   12663927
   REFERENCE   2  (bases 1 to 3218031)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (30-MAR-2003) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3218031)
     AUTHORS   Paulsen,I., Banerjei,L., Myers,G., Nelson,K., Seshadri,R., Read,T.,
               Fouts,D., Eisen,J., Gill,S., Heidelberg,J., Tettelin,H., Dodson,R.,
               Umayam,L., Brinkac,L., Beanan,M., Daugherty,S., DeBoy,R.,
               Durkin,A., Kolonay,J., Madupu,R., Nelson,W., Vamathevan,J.,
               Tran,B., Upton,J., Hansen,T., Shetty,J., Khouri,H., Utterback,T.,
               Radune,D., Ketchum,K., Dougherty,B. and Fraser,C.
     TITLE     Direct Submission
     JOURNAL   Submitted (03-FEB-2003) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE016830.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
248466	249987	+	1522	29374661	Ef16SA	-	16S ribosomal RNA
250246	253154	+	2909	29374661	Ef23SA	-	23S ribosomal RNA
253255	253370	+	116	29374661	Ef5SA	-	5S ribosomal RNA
253385	253457	+	73	29374661	tRNA-Val-1	-	^{13 Val tRNA}
253464	253536	+	73	29374661	tRNA-Lys-1	-	^{10 Lys tRNA}
253553	253634	+	82	29374661	tRNA-Leu-1	-	^{15 Leu tRNA}
253641	253716	+	76	29374661	tRNA-Thr-1	-	^{12 Thr tRNA}
253721	253792	+	72	29374661	tRNA-Gly-1	-	^{01 Gly tRNA}
253808	253893	+	86	29374661	tRNA-Leu-2	-	^{15 Leu tRNA}
253908	253981	+	74	29374661	tRNA-Arg-1	-	^{11 Arg tRNA}
253993	254066	+	74	29374661	tRNA-Pro-1	-	^{03 Pro tRNA}
254080	254152	+	73	29374661	tRNA-Ala-1	-	^{02 Ala tRNA}
254176	254249	+	74	29374661	tRNA-Met-1	-	^{16 Met tRNA}
254270	254343	+	74	29374661	tRNA-Met-2	-	^{16 Met tRNA}
254377	254466	+	90	29374661	tRNA-Ser-1	-	^{08 Ser tRNA}
254500	254573	+	74	29374661	tRNA-Met-3	-	^{16 Met tRNA}
254612	254688	+	77	29374661	tRNA-Asp-1	-	^{06 Asp tRNA}
254690	254760	+	71	29374661	tRNA-Gly-2	-	^{01 Gly tRNA}
254770	254843	+	74	29374661	tRNA-Ile-1	-	^{14 Ile tRNA}
254858	254929	+	72	29374661	tRNA-Glu-1	-	^{04 Glu tRNA}
254942	255031	+	90	29374661	tRNA-Ser-2	-	^{08 Ser tRNA}
255065	255138	+	74	29374661	tRNA-Met-4	-	^{16 Met tRNA}
255187	255260	+	74	29374661	tRNA-Asp-2	-	^{06 Asp tRNA}
255266	255338	+	73	29374661	tRNA-Phe-1	-	^{17 Phe tRNA}
255353	255423	+	71	29374661	tRNA-Gly-3	-	^{01 Gly tRNA}
255437	255510	+	74	29374661	tRNA-Ile-2	-	^{14 Ile tRNA}
255521	255608	+	88	29374661	tRNA-Ser-3	-	^{08 Ser tRNA}
255624	255695	+	72	29374661	tRNA-Glu-2	-	^{04 Glu tRNA}
326260	326333	+	74	29374661	tRNA-Met-5	-	^{16 Met tRNA}
446802	446874	+	73	29374661	tRNA-Lys-2	-	^{10 Lys tRNA}
532143	532216	+	74	29374661	tRNA-Met-6	-	^{16 Met tRNA}
532899	532973	+	75	29374661	tRNA-Pseudo-1	-
739754	739825	-	72	29374661	tRNA-Arg-2	-	^{11 Arg tRNA}
930973	931046	-	74	29374661	tRNA-Arg-3	-	^{11 Arg tRNA}
980392	980465	+	74	29374661	tRNA-Arg-4	-	^{11 Arg tRNA}
1018187	1019708	+	1522	29374661	Ef16SB	-	16S ribosomal RNA
1019820	1019892	+	73	29374661	tRNA-Ala-2	-	^{02 Ala tRNA}
1020069	1022977	+	2909	29374661	Ef23SB	-	23S ribosomal RNA
1023078	1023193	+	116	29374661	Ef5SB	-	5S ribosomal RNA
1023200	1023273	+	74	29374661	tRNA-Asn-1	-	^{07 Asn tRNA}
1023317	1023405	+	89	29374661	tRNA-Ser-4	-	^{08 Ser tRNA}
1023423	1023494	+	72	29374661	tRNA-Glu-3	-	^{04 Glu tRNA}
1023522	1023594	+	73	29374661	tRNA-Val-2	-	^{13 Val tRNA}
1023605	1023680	+	76	29374661	tRNA-Asp-3	-	^{06 Asp tRNA}
1023726	1023798	+	73	29374661	tRNA-Phe-2	-	^{17 Phe tRNA}
1023804	1023884	+	81	29374661	tRNA-Tyr-1	-	^{18 Tyr tRNA}
1023889	1023962	+	74	29374661	tRNA-Trp-1	-	^{20 Trp tRNA}
1023999	1024071	+	73	29374661	tRNA-His-1	-	^{09 His tRNA}
1024086	1024157	+	72	29374661	tRNA-Gln-1	-	^{05 Gln tRNA}
1024183	1024253	+	71	29374661	tRNA-Cys-1	-	^{19 Cys tRNA}
1024267	1024350	+	84	29374661	tRNA-Leu-3	-	^{15 Leu tRNA}
1281634	1281720	+	87	29374661	tRNA-Leu-4	-	^{15 Leu tRNA}
1292967	1293047	+	81	29374661	tRNA-Tyr-2	-	^{18 Tyr tRNA}
1293057	1293128	+	72	29374661	tRNA-Gln-2	-	^{05 Gln tRNA}
1415796	1415880	+	85	29374661	tRNA-Lys-3	-	^{10 Lys tRNA}
1443937	1444010	+	74	29374661	tRNA-Met-7	-	^{16 Met tRNA}
1924393	1924466	-	74	29374661	tRNA-Met-8	-	^{16 Met tRNA}
1951975	1952046	-	72	29374661	tRNA-Trp-2	-	^{20 Trp tRNA}
2004680	2004752	+	73	29374661	tRNA-Thr-2	-	^{12 Thr tRNA}
2006276	2006349	-	74	29374661	tRNA-Met-9	-	^{16 Met tRNA}
2033399	2033470	-	72	29374661	tRNA-Cys-2	-	^{19 Cys tRNA}
2462327	2462399	-	73	29374661	tRNA-Thr-3	-	^{12 Thr tRNA}
2700255	2700344	-	90	29374661	tRNA-Ser-5	-	^{08 Ser tRNA}
2722698	2722769	-	72	29374661	tRNA-Trp-3	-	^{20 Trp tRNA}
2768316	2768389	-	74	29374661	tRNA-Asn-2	-	^{07 Asn tRNA}
2768396	2768511	-	116	29374661	Ef5SC	-	5S ribosomal RNA
2768612	2771520	-	2909	29374661	Ef23SC	-	23S ribosomal RNA
2771696	2771768	-	73	29374661	tRNA-Ala-3	-	^{02 Ala tRNA}
2771880	2773401	-	1522	29374661	Ef16SC	-	16S ribosomal RNA
3164359	3164432	-	74	29374661	tRNA-Pro-2	-	^{03 Pro tRNA}
3164522	3164595	-	74	29374661	tRNA-Arg-5	-	^{11 Arg tRNA}
3164610	3164695	-	86	29374661	tRNA-Leu-5	-	^{15 Leu tRNA}
3164711	3164782	-	72	29374661	tRNA-Gly-4	-	^{01 Gly tRNA}
3164787	3164862	-	76	29374661	tRNA-Thr-4	-	^{12 Thr tRNA}
3164869	3164950	-	82	29374661	tRNA-Leu-6	-	^{15 Leu tRNA}
3164967	3165039	-	73	29374661	tRNA-Lys-4	-	^{10 Lys tRNA}
3165046	3165118	-	73	29374661	tRNA-Val-3	-	^{13 Val tRNA}
3165133	3165248	-	116	29374661	Ef5SD	-	5S ribosomal RNA
3165349	3168257	-	2909	29374661	Ef23SD	-	23S ribosomal RNA
3168516	3170037	-	1522	29374661	Ef16SD	-	16S ribosomal RNA