Геном прокариот/Материалы:NC 007514

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007514            2572079 bp    DNA     circular BCT 09-AUG-2007
   DEFINITION  Chlorobium chlorochromatii CaD3, complete genome.
   ACCESSION   NC_007514
   VERSION     NC_007514.1  GI:78187984
   KEYWORDS    .
   SOURCE      Chlorobium chlorochromatii CaD3
     ORGANISM  Chlorobium chlorochromatii CaD3
               Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae;
               Chlorobium/Pelodictyon group; Chlorobium.
   REFERENCE   1  (bases 1 to 2572079)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Bryant,D.,
               Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Ivanova,N. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Chlorobium chlorochromatii CaD3
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2572079)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (27-OCT-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2572079)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Bryant,D.,
               Schmutz,J., Larimer,F., Land,M., Ivanova,N. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (12-AUG-2005) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000108.
               URL -- http://www.jgi.doe.gov
               Source DNA and bacteria available from Don Bryant (dab14@psu.edu)
               Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
10616	10692	-	77	78187984	Cag_t01	-	^{13 Val tRNA}
75584	75656	+	73	78187984	Cag_t02	-	^{02 Ala tRNA}
102592	104100	+	1509	78187984	Cag_r1	-	16S ribosomal RNA
104236	104312	+	77	78187984	Cag_t03	-	^{14 Ile tRNA}
104342	104417	+	76	78187984	Cag_t04	-	^{02 Ala tRNA}
104552	107472	+	2921	78187984	Cag_r2	-	23S ribosomal RNA
107553	107670	+	118	78187984	Cag_r3	-	5S ribosomal RNA
164847	164922	+	76	78187984	Cag_t05	-	^{11 Arg tRNA}
206029	206105	-	77	78187984	Cag_t06	-	^{13 Val tRNA}
352954	353031	-	78	78187984	Cag_t07	-	^{06 Asp tRNA}
399282	399354	+	73	78187984	Cag_t08	-	^{12 Thr tRNA}
399367	399451	+	85	78187984	Cag_t09	-	^{18 Tyr tRNA}
399460	399532	+	73	78187984	Cag_t10	-	^{12 Thr tRNA}
399570	399642	+	73	78187984	Cag_t11	-	^{20 Trp tRNA}
457755	457827	+	73	78187984	Cag_t12	-	^{17 Phe tRNA}
539473	539545	+	73	78187984	Cag_t13	-	^{10 Lys tRNA}
539576	539657	+	82	78187984	Cag_t14	-	^{15 Leu tRNA}
570229	570318	-	90	78187984	Cag_t15	-	^{08 Ser tRNA}
570333	570415	-	83	78187984	Cag_t16	-	^{08 Ser tRNA}
570522	570612	-	91	78187984	Cag_t17	-	^{08 Ser tRNA}
614696	614771	-	76	78187984	Cag_t18	-	^{02 Ala tRNA}
904266	904353	-	88	78187984	Cag_t19	-	^{15 Leu tRNA}
904368	904452	-	85	78187984	Cag_t20	-	^{15 Leu tRNA}
1161857	1161943	+	87	78187984	Cag_t21	-	^{08 Ser tRNA}
1264724	1264800	+	77	78187984	Cag_t22	-	^{16 Met tRNA}
1264812	1264887	+	76	78187984	Cag_t23	-	^{01 Gly tRNA}
1300530	1300606	+	77	78187984	Cag_t24	-	^{13 Val tRNA}
1498748	1498832	+	85	78187984	Cag_t25	-	^{15 Leu tRNA}
1501918	1501991	+	74	78187984	Cag_t26	-	^{19 Cys tRNA}
1582093	1582168	-	76	78187984	Cag_t27	-	^{03 Pro tRNA}
1582178	1582253	-	76	78187984	Cag_t28	-	^{11 Arg tRNA}
1613413	1613498	+	86	78187984	Cag_t29	-	^{15 Leu tRNA}
1748934	1749010	+	77	78187984	Cag_t30	-	^{16 Met tRNA}
1749027	1749100	+	74	78187984	Cag_t31	-	^{04 Glu tRNA}
1749108	1749184	+	77	78187984	Cag_t32	-	^{11 Arg tRNA}
1749199	1749275	+	77	78187984	Cag_t33	-	^{05 Gln tRNA}
1760904	1760979	-	76	78187984	Cag_t34	-	^{01 Gly tRNA}
1867271	1867346	-	76	78187984	Cag_t35	-	^{16 Met tRNA}
2008021	2008096	-	76	78187984	Cag_t36	-	^{10 Lys tRNA}
2025159	2025233	-	75	78187984	Cag_t37	-	^{04 Glu tRNA}
2025247	2025323	-	77	78187984	Cag_t38	-	^{09 His tRNA}
2025346	2025421	-	76	78187984	Cag_t39	-	^{11 Arg tRNA}
2025445	2025517	-	73	78187984	Cag_t40	-	^{03 Pro tRNA}
2030701	2030775	-	75	78187984	Cag_t41	-	^{05 Gln tRNA}
2060078	2060151	-	74	78187984	Cag_t42	-	^{03 Pro tRNA}
2165727	2165798	+	72	78187984	Cag_t43	-	^{07 Asn tRNA}
2354631	2354706	-	76	78187984	Cag_t44	-	^{01 Gly tRNA}
2554003	2554075	+	73	78187984	Cag_t45	-	^{12 Thr tRNA}