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Геном прокариот/Материалы:NC 007644

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»
   LOCUS       NC_007644            2628784 bp    DNA     circular BCT 24-MAY-2007
   DEFINITION  Moorella thermoacetica ATCC 39073, complete genome.
   ACCESSION   NC_007644
   VERSION     NC_007644.1  GI:83588874
   KEYWORDS    .
   SOURCE      Moorella thermoacetica ATCC 39073
     ORGANISM  Moorella thermoacetica ATCC 39073
               Bacteria; Firmicutes; Clostridia; Thermoanaerobacteriales;
               Thermoanaerobacteriaceae; Moorella group; Moorella.
   REFERENCE   1  (bases 1 to 2628784)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chertkov,O.,
               Saunders,E.H., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P.,
               Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Anderson,I.,
               Richardson,P. and Ragsdale,S.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Moorella thermoacetica ATCC 39073
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2628784)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (13-DEC-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2628784)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chertkov,O.,
               Saunders,E.H., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P.,
               Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Anderson,I. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (08-DEC-2005) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000232.
               URL -- http://www.jgi.doe.gov
               Source DNA available from Stephen Ragsdale (sragsdale@unl.edu)
               Bacteria available from ATCC: ATCC 39073
               Contacts: Stephen Ragsdale (sragsdale@unl.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LANL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.


Расположение РНК

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Начало Конец Направление Длина PID Ген COG Комментарий
18512 18762 + 251 83588874 Moth_R0001 -
26136 26227 + 92 83588874 Moth_R0002 - 08 Ser tRNA
26240 26335 + 96 83588874 Moth_R0003 - 08 Ser tRNA
26450 26526 + 77 83588874 Moth_R0004 - 11 Arg tRNA
26539 26615 + 77 83588874 Moth_R0005 - 11 Arg tRNA
27077 27168 + 92 83588874 Moth_R0006 - 08 Ser tRNA
28593 28687 + 95 83588874 Moth_R0007 - 08 Ser tRNA
28823 28925 + 103 83588874 Moth_R0008 - 4.5S RNA, SRP RNA
99445 99521 + 77 83588874 Moth_R0009 - 16 Met tRNA
99530 99604 + 75 83588874 Moth_R0010 - 04 Glu tRNA
134847 134950 - 104 83588874 Moth_R0011 -
147998 149552 + 1555 83588874 Moth_R0012 - 16S ribosomal RNA
149668 149744 + 77 83588874 Moth_R0013 - 14 Ile tRNA
149830 149905 + 76 83588874 Moth_R0014 - 02 Ala tRNA
149966 152937 + 2972 83588874 Moth_R0015 - 23S ribosomal RNA
153004 153118 + 115 83588874 Moth_R0016 - 5S ribosomal RNA
153169 153243 + 75 83588874 Moth_R0017 - 07 Asn tRNA
284252 284606 + 355 83588874 Moth_R0018 - tmRNA, 10Sa RNA
377277 377352 + 76 83588874 Moth_R0019 - 02 Ala tRNA
377364 377438 + 75 83588874 Moth_R0020 - 13 Val tRNA
400987 401094 - 108 83588874 Moth_R0021 -
409831 409997 + 167 83588874 Moth_R0022 -
417084 417159 + 76 83588874 Moth_R0023 - 02 Ala tRNA
459162 459289 + 128 83588874 Moth_R0024 -
540866 540939 + 74 83588874 Moth_R0025 - 01 Gly tRNA
540945 541021 + 77 83588874 Moth_R0026 - 11 Arg tRNA
541034 541110 + 77 83588874 Moth_R0027 - 09 His tRNA
541123 541198 + 76 83588874 Moth_R0028 - 05 Gln tRNA
541206 541281 + 76 83588874 Moth_R0029 - 10 Lys tRNA
541289 541373 + 85 83588874 Moth_R0030 - 15 Leu tRNA
545895 545969 + 75 83588874 Moth_R0031 - 01 Gly tRNA
569533 569640 + 108 83588874 Moth_R0032 -
649555 649629 + 75 83588874 Moth_R0033 - 07 Asn tRNA
649634 649708 + 75 83588874 Moth_R0034 - 16 Met tRNA
651775 652137 + 363 83588874 Moth_R0035 - RNA component of RNaseP
652596 652670 + 75 83588874 Moth_R0036 -
847282 847385 + 104 83588874 Moth_R0037 -
930570 930644 - 75 83588874 Moth_R0038 - 12 Thr tRNA
950178 950293 + 116 83588874 Moth_R0039 - RFN element; FMN riboswitch
996185 996342 - 158 83588874 Moth_R0040 -
1093214 1093385 + 172 83588874 Moth_R0041 -
1116483 1116660 + 178 83588874 Moth_R0042 -
1152499 1152574 - 76 83588874 Moth_R0043 - 04 Glu tRNA
1160077 1160150 + 74 83588874 Moth_R0044 - 05 Gln tRNA
1172671 1172746 + 76 83588874 Moth_R0045 - 20 Trp tRNA
1194764 1194839 - 76 83588874 Moth_R0046 - 10 Lys tRNA
1194845 1194921 - 77 83588874 Moth_R0047 - 11 Arg tRNA
1204832 1204935 - 104 83588874 Moth_R0048 -
1221972 1222215 - 244 83588874 Moth_R0049 -
1250938 1251015 + 78 83588874 Moth_R0050 - 03 Pro tRNA
1251025 1251100 + 76 83588874 Moth_R0051 - 12 Thr tRNA
1265031 1265132 - 102 83588874 Moth_R0052 -
1272647 1272748 - 102 83588874 Moth_R0053 -
1278513 1278600 - 88 83588874 Moth_R0054 - 15 Leu tRNA
1324983 1325060 - 78 83588874 Moth_R0055 - 03 Pro tRNA
1354167 1354284 - 118 83588874 Moth_R0056 -
1390416 1390600 + 185 83588874 Moth_R0057 -
1412184 1412323 + 140 83588874 Moth_R0058 -
1448657 1448759 + 103 83588874 Moth_R0059 -
1696140 1696239 + 100 83588874 Moth_R0060 -
1741459 1741649 + 191 83588874 Moth_R0061 -
1814276 1814512 - 237 83588874 Moth_R0062 -
1816334 1816408 - 75 83588874 Moth_R0063 - 13 Val tRNA
1849506 1849580 + 75 83588874 Moth_R0064 - 01 Gly tRNA
1849593 1849668 + 76 83588874 Moth_R0065 - 19 Cys tRNA
1850397 1850485 + 89 83588874 Moth_R0066 - 15 Leu tRNA
1874189 1874264 - 76 83588874 Moth_R0067 - 17 Phe tRNA
1874270 1874346 - 77 83588874 Moth_R0068 - 06 Asp tRNA
1874352 1874426 - 75 83588874 Moth_R0069 - 13 Val tRNA
1893467 1893551 - 85 83588874 Moth_R0070 - 15 Leu tRNA
1902042 1902128 + 87 83588874 Moth_R0071 - 15 Leu tRNA
1943069 1943146 + 78 83588874 Moth_R0072 - 03 Pro tRNA
2020095 2020247 - 153 83588874 Moth_R0073 -
2020248 2020351 - 104 83588874 Moth_R0074 -
2031807 2031907 - 101 83588874 Moth_R0075 -
2040916 2041016 - 101 83588874 Moth_R0076 -
2070462 2070570 + 109 83588874 Moth_R0077 -
2145827 2145928 - 102 83588874 Moth_R0078 -
2145914 2146017 - 104 83588874 Moth_R0079 -
2197504 2197633 + 130 83588874 Moth_R0080 -
2328508 2328581 + 74 83588874 Moth_R0081 -
2349172 2349367 - 196 83588874 Moth_R0082 -
2419169 2419243 - 75 83588874 Moth_R0083 - 01 Gly tRNA
2419550 2419625 + 76 83588874 Moth_R0084 - 10 Lys tRNA
2419633 2419707 + 75 83588874 Moth_R0085 - 04 Glu tRNA
2419713 2419789 + 77 83588874 Moth_R0086 - 06 Asp tRNA
2533880 2534177 - 298 83588874 Moth_R0087 -
2586313 2586388 - 76 83588874 Moth_R0088 - 12 Thr tRNA
2586390 2586465 - 76 83588874 Moth_R0089 - 16 Met tRNA
2586482 2586567 - 86 83588874 Moth_R0090 - 18 Tyr tRNA
2591948 2592205 - 258 83588874 Moth_R0091 -
2603151 2603246 - 96 83588874 Moth_R0092 - Sec tRNA
Источник — https://ru.wikiversity.org/w/index.php?title=Геном_прокариот/Материалы:NC_007644&oldid=156603