Геном прокариот/Материалы:NC 008533

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_008533            2046115 bp    DNA     circular BCT 23-JAN-2007
   DEFINITION  Streptococcus pneumoniae D39, complete genome.
   ACCESSION   NC_008533
   VERSION     NC_008533.1  GI:116515308
   KEYWORDS    .
   SOURCE      Streptococcus pneumoniae D39
     ORGANISM  Streptococcus pneumoniae D39
               Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;
               Streptococcus.
   REFERENCE   1  (bases 1 to 2046115)
     AUTHORS   Lanie,J.A., Ng,W.L., Kazmierczak,K.M., Andrzejewski,T.M.,
               Davidsen,T.M., Wayne,K.J., Tettelin,H., Glass,J.I. and Winkler,M.E.
     TITLE     Genome sequence of Avery's virulent serotype 2 strain D39 of
               Streptococcus pneumoniae and comparison with that of unencapsulated
               laboratory strain R6
     JOURNAL   J. Bacteriol. 189 (1), 38-51 (2007)
      PUBMED   17041037
   REFERENCE   2  (bases 1 to 2046115)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (24-OCT-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2046115)
     AUTHORS   Lanie,J.A., Ng,W.-L., Kazmierczak,K.M., Andrzejewski,T.M.,
               Davidsen,T.M., Wayne,K.J., Tettelin,H., Glass,J.I. and Winkler,M.E.
     TITLE     Direct Submission
     JOURNAL   Submitted (17-JUL-2006) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000410.
               Source bacterial stock (NCTC 7466) is available from the National
               Collection of Type Cultures, London, UK (nctc@hpa.org.uk).
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
14827	14898	+	72	116515308	SPD_0015	-	^{04 Glu tRNA}
15164	16621	+	1458	116515308	SPD_0016	-	16S ribosomal RNA
16748	16820	+	73	116515308	SPD_0017	-	^{02 Ala tRNA}
16945	19846	+	2902	116515308	SPD_0018	-	23S ribosomal RNA
19923	20038	+	116	116515308	SPD_0019	-	5S ribosomal RNA
20044	20117	+	74	116515308	SPD_0020	-	^{07 Asn tRNA}
24631	24815	+	185	116515308	SPD_0026	-	Protein and peptide secretion
344149	344552	+	404	116515308	SPD_0340	-	Ribonuclease P - RNA component
766945	767025	+	81	116515308	SPD_0755	-	^{18 Tyr tRNA}
767035	767106	+	72	116515308	SPD_0756	-	^{05 Gln tRNA}
781138	781482	+	345	116515308	SPD_0769	-	tmRNA
781668	781755	-	88	116515308	SPD_0770	-	^{08 Ser tRNA}
912395	912467	+	73	116515308	SPD_0899	-	^{12 Thr tRNA}
1139077	1139148	-	72	116515308	SPD_1106	-	^{11 Arg tRNA}
1180908	1180979	-	72	116515308	SPD_1147	-	^{11 Arg tRNA}
1429525	1429610	-	86	116515308	SPD_1410	-	^{15 Leu tRNA}
1598070	1598142	+	73	116515308	SPD_1581	-	^{10 Lys tRNA}
1698314	1698401	-	88	116515308	SPD_1682	-	^{08 Ser tRNA}
1698408	1698481	-	74	116515308	SPD_1683	-	^{14 Ile tRNA}
1698517	1698587	-	71	116515308	SPD_1684	-	^{01 Gly tRNA}
1698607	1698679	-	73	116515308	SPD_1685	-	^{17 Phe tRNA}
1698683	1698756	-	74	116515308	SPD_1686	-	^{16 Met tRNA}
1698770	1698859	-	90	116515308	SPD_1687	-	^{08 Ser tRNA}
1698870	1698943	-	74	116515308	SPD_1688	-	^{16 Met tRNA}
1698957	1699030	-	74	116515308	SPD_1689	-	^{16 Met tRNA}
1699036	1699109	-	74	116515308	SPD_1690	-	^{03 Pro tRNA}
1699125	1699198	-	74	116515308	SPD_1691	-	^{11 Arg tRNA}
1699208	1699293	-	86	116515308	SPD_1692	-	^{15 Leu tRNA}
1699301	1699372	-	72	116515308	SPD_1693	-	^{01 Gly tRNA}
1699395	1699467	-	73	116515308	SPD_1694	-	^{12 Thr tRNA}
1699486	1699567	-	82	116515308	SPD_1695	-	^{15 Leu tRNA}
1699573	1699645	-	73	116515308	SPD_1696	-	^{10 Lys tRNA}
1699670	1699742	-	73	116515308	SPD_1697	-	^{06 Asp tRNA}
1699745	1699817	-	73	116515308	SPD_1698	-	^{13 Val tRNA}
1699822	1699937	-	116	116515308	SPD_1699	-	5S ribosomal RNA
1700014	1702915	-	2902	116515308	SPD_1700	-	23S ribosomal RNA
1703040	1703112	-	73	116515308	SPD_1701	-	^{02 Ala tRNA}
1703239	1704696	-	1458	116515308	SPD_1702	-	16S ribosomal RNA
1704962	1705033	-	72	116515308	SPD_1703	-	^{04 Glu tRNA}
1759580	1759650	+	71	116515308	SPD_1760	-	^{19 Cys tRNA}
1796587	1796660	-	74	116515308	SPD_1804	-	^{03 Pro tRNA}
1796676	1796749	-	74	116515308	SPD_1805	-	^{11 Arg tRNA}
1796759	1796844	-	86	116515308	SPD_1806	-	^{15 Leu tRNA}
1796852	1796923	-	72	116515308	SPD_1807	-	^{01 Gly tRNA}
1796946	1797018	-	73	116515308	SPD_1808	-	^{12 Thr tRNA}
1797037	1797118	-	82	116515308	SPD_1809	-	^{15 Leu tRNA}
1797124	1797196	-	73	116515308	SPD_1810	-	^{10 Lys tRNA}
1797221	1797293	-	73	116515308	SPD_1811	-	^{06 Asp tRNA}
1797296	1797368	-	73	116515308	SPD_1812	-	^{13 Val tRNA}
1797373	1797488	-	116	116515308	SPD_1813	-	5S ribosomal RNA
1797565	1800466	-	2902	116515308	SPD_1814	-	23S ribosomal RNA
1800591	1800663	-	73	116515308	SPD_1815	-	^{02 Ala tRNA}
1800790	1802247	-	1458	116515308	SPD_1816	-	16S ribosomal RNA
1802513	1802584	-	72	116515308	SPD_1817	-	^{04 Glu tRNA}
1858274	1858357	-	84	116515308	SPD_1879	-	^{15 Leu tRNA}
1858367	1858438	-	72	116515308	SPD_1880	-	^{05 Gln tRNA}
1858449	1858521	-	73	116515308	SPD_1881	-	^{09 His tRNA}
1858536	1858606	-	71	116515308	SPD_1882	-	^{20 Trp tRNA}
1858611	1858691	-	81	116515308	SPD_1883	-	^{18 Tyr tRNA}
1858704	1858776	-	73	116515308	SPD_1884	-	^{17 Phe tRNA}
1858780	1858853	-	74	116515308	SPD_1885	-	^{16 Met tRNA}
1858864	1858953	-	90	116515308	SPD_1886	-	^{08 Ser tRNA}
1859037	1859110	-	74	116515308	SPD_1887	-	^{14 Ile tRNA}
1859145	1859215	-	71	116515308	SPD_1888	-	^{01 Gly tRNA}
1859221	1859293	-	73	116515308	SPD_1889	-	^{13 Val tRNA}
1859298	1859413	-	116	116515308	SPD_1890	-	5S ribosomal RNA
1859490	1862391	-	2902	116515308	SPD_1891	-	23S ribosomal RNA
1862516	1862588	-	73	116515308	SPD_1892	-	^{02 Ala tRNA}
1862715	1864172	-	1458	116515308	SPD_1893	-	16S ribosomal RNA
1864438	1864509	-	72	116515308	SPD_1894	-	^{04 Glu tRNA}
2040540	2040613	-	74	116515308	SPD_2061	-	^{07 Asn tRNA}
2040619	2040690	-	72	116515308	SPD_2062	-	^{04 Glu tRNA}
2043127	2043200	-	74	116515308	SPD_2066	-	^{11 Arg tRNA}