Геном прокариот/Материалы:NC 008555

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_008555            2814130 bp    DNA     circular BCT 31-OCT-2006
   DEFINITION  Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
   ACCESSION   NC_008555
   VERSION     NC_008555.1  GI:116871422
   KEYWORDS    .
   SOURCE      Listeria welshimeri serovar 6b str. SLCC5334
     ORGANISM  Listeria welshimeri serovar 6b str. SLCC5334
               Bacteria; Firmicutes; Bacillales; Listeriaceae; Listeria.
   REFERENCE   1
     AUTHORS   Hain,T., Steinweg,C., Kuenne,C.T., Billion,A., Ghai,R.,
               Chatterjee,S.S., Domann,E., Karst,U., Goesmann,A., Bekel,T.,
               Bartels,D., Kaiser,O., Meyer,F., Puhler,A., Weisshaar,B.,
               Wehland,J., Liang,C., Dandekar,T., Lampidis,R., Kreft,J., Goebel,W.
               and Chakraborty,T.
     TITLE     Whole-Genome Sequence of Listeria welshimeri Reveals Common Steps
               in Genome Reduction with Listeria innocua as Compared to Listeria
               monocytogenes
     JOURNAL   J. Bacteriol. 188 (21), 7405-7415 (2006)
      PUBMED   16936040
   REFERENCE   2  (bases 1 to 2814130)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (30-OCT-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2814130)
     AUTHORS   Hain,T.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-MAY-2006) Hain T., Institute for Medical
               Microbiology, Justus-Liebig-University, Frankfurter Strasse 107,
               35392 Giessen, GERMANY
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AM263198.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
75863	75935	+	73	116871422	lwe_tRNA_01	-	^{10 Lys tRNA}
193888	195442	+	1555	116871422	lwe_rRNA_0001	-	16S ribosomal RNA
195687	198617	+	2931	116871422	lwe_rRNA_0002	-	23S ribosomal RNA
198698	198807	+	110	116871422	lwe_rRNA_0003	-	5S ribosomal RNA
198821	198893	+	73	116871422	lwe_tRNA_02	-	^{13 Val tRNA}
198902	198977	+	76	116871422	lwe_tRNA_03	-	^{12 Thr tRNA}
199018	199090	+	73	116871422	lwe_tRNA_04	-	^{10 Lys tRNA}
199096	199177	+	82	116871422	lwe_tRNA_05	-	^{15 Leu tRNA}
199193	199264	+	72	116871422	lwe_tRNA_06	-	^{01 Gly tRNA}
199286	199371	+	86	116871422	lwe_tRNA_07	-	^{15 Leu tRNA}
199384	199457	+	74	116871422	lwe_tRNA_08	-	^{11 Arg tRNA}
199468	199541	+	74	116871422	lwe_tRNA_09	-	^{03 Pro tRNA}
199561	199636	+	76	116871422	lwe_tRNA_10	-	^{02 Ala tRNA}
199911	201465	+	1555	116871422	lwe_rRNA_0004	-	16S ribosomal RNA
201710	204640	+	2931	116871422	lwe_rRNA_0005	-	23S ribosomal RNA
204721	204830	+	110	116871422	lwe_rRNA_0006	-	5S ribosomal RNA
642591	642680	-	90	116871422	lwe_tRNA_11	-	^{08 Ser tRNA}
914096	914183	+	88	116871422	lwe_tRNA_12	-	^{08 Ser tRNA}
918069	918140	+	72	116871422	lwe_tRNA_13	-	^{04 Glu tRNA}
918167	918239	+	73	116871422	lwe_tRNA_14	-	^{06 Asp tRNA}
943832	943902	+	71	116871422	lwe_tRNA_15	-	^{01 Gly tRNA}
1207526	1207599	+	74	116871422	lwe_tRNA_16	-	^{11 Arg tRNA}
1717453	1717524	-	72	116871422	lwe_tRNA_17	-	^{04 Glu tRNA}
1717530	1717620	-	91	116871422	lwe_tRNA_18	-	^{08 Ser tRNA}
1717656	1717728	-	73	116871422	lwe_tRNA_19	-	^{07 Asn tRNA}
1717735	1717808	-	74	116871422	lwe_tRNA_20	-	^{14 Ile tRNA}
1717835	1717905	-	71	116871422	lwe_tRNA_21	-	^{01 Gly tRNA}
1717930	1718002	-	73	116871422	lwe_tRNA_22	-	^{09 His tRNA}
1718032	1718104	-	73	116871422	lwe_tRNA_23	-	^{17 Phe tRNA}
1718109	1718184	-	76	116871422	lwe_tRNA_24	-	^{06 Asp tRNA}
1718189	1718262	-	74	116871422	lwe_tRNA_25	-	^{16 Met tRNA}
1718304	1718393	-	90	116871422	lwe_tRNA_26	-	^{08 Ser tRNA}
1718416	1718489	-	74	116871422	lwe_tRNA_27	-	^{16 Met tRNA}
1718501	1718574	-	74	116871422	lwe_tRNA_28	-	^{16 Met tRNA}
1718628	1718700	-	73	116871422	lwe_tRNA_29	-	^{02 Ala tRNA}
1718720	1718793	-	74	116871422	lwe_tRNA_30	-	^{03 Pro tRNA}
1718804	1718877	-	74	116871422	lwe_tRNA_31	-	^{11 Arg tRNA}
1718887	1718972	-	86	116871422	lwe_tRNA_32	-	^{15 Leu tRNA}
1718990	1719064	-	75	116871422	lwe_tRNA_33	-	^{01 Gly tRNA}
1719080	1719161	-	82	116871422	lwe_tRNA_34	-	^{15 Leu tRNA}
1719167	1719239	-	73	116871422	lwe_tRNA_35	-	^{10 Lys tRNA}
1719280	1719355	-	76	116871422	lwe_tRNA_36	-	^{12 Thr tRNA}
1719364	1719436	-	73	116871422	lwe_tRNA_37	-	^{13 Val tRNA}
1719450	1719559	-	110	116871422	lwe_rRNA_0007	-	5S ribosomal RNA
1719640	1722570	-	2931	116871422	lwe_rRNA_0008	-	23S ribosomal RNA
1722815	1724369	-	1555	116871422	lwe_rRNA_0009	-	16S ribosomal RNA
1753418	1753489	+	72	116871422	lwe_tRNA_38	-	^{11 Arg tRNA}
1823517	1823626	-	110	116871422	lwe_rRNA_0010	-	5S ribosomal RNA
1823707	1826637	-	2931	116871422	lwe_rRNA_0011	-	23S ribosomal RNA
1826882	1828436	-	1555	116871422	lwe_rRNA_0012	-	16S ribosomal RNA
2135441	2135527	+	87	116871422	lwe_tRNA_39	-	^{15 Leu tRNA}
2187048	2187119	+	72	116871422	lwe_tRNA_40	-	^{04 Glu tRNA}
2187276	2187349	+	74	116871422	lwe_tRNA_41	-	^{12 Thr tRNA}
2187359	2187442	+	84	116871422	lwe_tRNA_42	-	^{18 Tyr tRNA}
2187454	2187528	+	75	116871422	lwe_tRNA_43	-	^{05 Gln tRNA}
2187535	2187607	+	73	116871422	lwe_tRNA_44	-	^{10 Lys tRNA}
2355399	2355485	-	87	116871422	lwe_tRNA_45	-	^{15 Leu tRNA}
2355531	2355604	-	74	116871422	lwe_tRNA_46	-	^{19 Cys tRNA}
2355624	2355695	-	72	116871422	lwe_tRNA_47	-	^{01 Gly tRNA}
2355701	2355772	-	72	116871422	lwe_tRNA_48	-	^{05 Gln tRNA}
2355802	2355874	-	73	116871422	lwe_tRNA_49	-	^{09 His tRNA}
2355890	2355963	-	74	116871422	lwe_tRNA_50	-	^{20 Trp tRNA}
2355971	2356054	-	84	116871422	lwe_tRNA_51	-	^{18 Tyr tRNA}
2356077	2356149	-	73	116871422	lwe_tRNA_52	-	^{17 Phe tRNA}
2356154	2356229	-	76	116871422	lwe_tRNA_53	-	^{06 Asp tRNA}
2356236	2356309	-	74	116871422	lwe_tRNA_54	-	^{16 Met tRNA}
2356331	2356406	-	76	116871422	lwe_tRNA_55	-	^{13 Val tRNA}
2356464	2356535	-	72	116871422	lwe_tRNA_56	-	^{04 Glu tRNA}
2356570	2356658	-	89	116871422	lwe_tRNA_57	-	^{08 Ser tRNA}
2356665	2356740	-	76	116871422	lwe_tRNA_58	-	^{07 Asn tRNA}
2356755	2356864	-	110	116871422	lwe_rRNA_0013	-	5S ribosomal RNA
2356945	2359875	-	2931	116871422	lwe_rRNA_0014	-	23S ribosomal RNA
2360048	2360123	-	76	116871422	lwe_tRNA_59	-	^{02 Ala tRNA}
2360171	2360244	-	74	116871422	lwe_tRNA_60	-	^{14 Ile tRNA}
2360373	2361927	-	1555	116871422	lwe_rRNA_0015	-	16S ribosomal RNA
2451865	2451936	-	72	116871422	lwe_tRNA_61	-	^{11 Arg tRNA}
2578786	2578858	-	73	116871422	lwe_tRNA_62	-	^{12 Thr tRNA}
2578883	2578958	-	76	116871422	lwe_tRNA_63	-	^{07 Asn tRNA}
2578973	2579082	-	110	116871422	lwe_rRNA_0016	-	5S ribosomal RNA
2579163	2582093	-	2931	116871422	lwe_rRNA_0017	-	23S ribosomal RNA
2582266	2582341	-	76	116871422	lwe_tRNA_64	-	^{02 Ala tRNA}
2582389	2582462	-	74	116871422	lwe_tRNA_65	-	^{14 Ile tRNA}
2582591	2584145	-	1555	116871422	lwe_rRNA_0018	-	16S ribosomal RNA
2806196	2806268	+	73	116871422	lwe_tRNA_66	-	^{13 Val tRNA}