Геном прокариот/Материалы:NC 009085

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009085            3976747 bp    DNA     circular BCT 02-MAY-2007
   DEFINITION  Acinetobacter baumannii ATCC 17978, complete genome.
   ACCESSION   NC_009085
   VERSION     NC_009085.1  GI:126640115
   KEYWORDS    .
   SOURCE      Acinetobacter baumannii ATCC 17978
     ORGANISM  Acinetobacter baumannii ATCC 17978
               Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
               Moraxellaceae; Acinetobacter.
   REFERENCE   1  (bases 1 to 3976747)
     AUTHORS   Smith,M.G., Gianoulis,T.A., Pukatzki,S., Mekalanos,J.J.,
               Ornston,L.N., Gerstein,M. and Snyder,M.
     TITLE     New insights into Acinetobacter baumannii pathogenesis revealed by
               high-density pyrosequencing and transposon mutagenesis
     JOURNAL   Genes Dev. 21 (5), 601-614 (2007)
      PUBMED   17344419
   REFERENCE   2  (bases 1 to 3976747)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (05-MAR-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3976747)
     AUTHORS   Smith,M.G., Gianoulis,T.A., Pukatzki,S., Mekalanos,J.,
               Ornston,L.N., Gerstein,M. and Snyder,M.
     TITLE     Direct Submission
     JOURNAL   Submitted (27-NOV-2006) Department of Molecular, Cellular, and
               Developmental Biology, Yale University, 266 Whitney Ave, New Haven,
               CT 06520, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000521.
               Source DNA and bacteria available from Michael Snyder
               (michael.snyder@yale.edu).
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
149160	149235	-	76	126640115	A1S_0120	-	^{01 Gly tRNA}
149281	149356	-	76	126640115	A1S_0121	-	^{01 Gly tRNA}
193327	194855	+	1529	126640115	A1S_r01	-	16S ribosomal RNA
194916	194992	+	77	126640115	A1S_0174	-	^{14 Ile tRNA}
195048	195123	+	76	126640115	A1S_0175	-	^{02 Ala tRNA}
195464	198366	+	2903	126640115	A1S_r02	-	23S ribosomal RNA
198530	198663	+	134	126640115	A1S_r03	-	5S ribosomal RNA
299874	299949	+	76	126640115	A1S_0275	-	^{12 Thr tRNA}
300006	300089	+	84	126640115	A1S_0276	-	^{18 Tyr tRNA}
300127	300202	+	76	126640115	A1S_0277	-	^{01 Gly tRNA}
300216	300290	+	75	126640115	A1S_0278	-	^{12 Thr tRNA}
301704	301779	+	76	126640115	A1S_0280	-	^{20 Trp tRNA}
359440	359524	+	85	126640115	A1S_0332	-	^{15 Leu tRNA}
359567	359643	+	77	126640115	A1S_0333	-	^{16 Met tRNA}
432905	432980	-	76	126640115	A1S_0400	-	^{10 Lys tRNA}
433003	433078	-	76	126640115	A1S_0401	-	^{10 Lys tRNA}
801009	801142	-	134	126640115	A1S_r04	-	5S ribosomal RNA
801307	804209	-	2903	126640115	A1S_r05	-	23S ribosomal RNA
804551	804626	-	76	126640115	A1S_0678	-	^{02 Ala tRNA}
804682	804758	-	77	126640115	A1S_0679	-	^{14 Ile tRNA}
804818	806346	-	1529	126640115	A1S_r06	-	16S ribosomal RNA
806834	806967	-	134	126640115	A1S_r07	-	5S ribosomal RNA
807132	810033	-	2902	126640115	A1S_r08	-	23S ribosomal RNA
810375	810450	-	76	126640115	A1S_0680	-	^{02 Ala tRNA}
810506	810582	-	77	126640115	A1S_0681	-	^{14 Ile tRNA}
810642	812170	-	1529	126640115	A1S_r09	-	16S ribosomal RNA
845404	845480	+	77	126640115	A1S_0714	-	^{03 Pro tRNA}
845537	845613	+	77	126640115	A1S_0715	-	^{11 Arg tRNA}
845647	845722	+	76	126640115	A1S_0716	-	^{09 His tRNA}
845727	845803	+	77	126640115	A1S_0717	-	^{03 Pro tRNA}
975667	975741	-	75	126640115	A1S_0830	-	^{05 Gln tRNA}
975834	975908	-	75	126640115	A1S_0831	-	^{05 Gln tRNA}
975930	976004	-	75	126640115	A1S_0832	-	^{05 Gln tRNA}
988301	988377	+	77	126640115	A1S_0846	-	^{16 Met tRNA}
998454	998530	+	77	126640115	A1S_0856	-	^{16 Met tRNA}
1229645	1229720	-	76	126640115	A1S_1064	-	^{04 Glu tRNA}
1237136	1237225	+	90	126640115	A1S_1071	-	^{08 Ser tRNA}
1432696	1432772	+	77	126640115	A1S_1223	-	^{16 Met tRNA}
1446432	1446507	-	76	126640115	A1S_1234	-	^{01 Gly tRNA}
1745303	1745379	-	77	126640115	A1S_1500	-	^{16 Met tRNA}
2600863	2600936	-	74	126640115	A1S_2236	-	^{20 Trp tRNA}
2601002	2601086	-	85	126640115	A1S_2237	-	^{15 Leu tRNA}
2601114	2601187	-	74	126640115	A1S_2238	-	^{20 Trp tRNA}
2601244	2601328	-	85	126640115	A1S_2239	-	^{15 Leu tRNA}
2678381	2678457	+	77	126640115	A1S_2310	-	^{11 Arg tRNA}
2715730	2715805	+	76	126640115	A1S_2344	-	^{07 Asn tRNA}
2715814	2715889	+	76	126640115	A1S_2345	-	^{07 Asn tRNA}
2716068	2716143	+	76	126640115	A1S_2346	-	^{07 Asn tRNA}
2800398	2800474	-	77	126640115	A1S_2415	-	^{13 Val tRNA}
2914391	2914466	+	76	126640115	A1S_2513	-	^{07 Asn tRNA}
3075212	3075301	-	90	126640115	A1S_2652	-	^{08 Ser tRNA}
3101819	3101892	+	74	126640115	A1S_2675	-	^{19 Cys tRNA}
3101904	3101989	+	86	126640115	A1S_2676	-	^{15 Leu tRNA}
3104050	3104135	+	86	126640115	A1S_2678	-	^{15 Leu tRNA}
3204642	3204714	+	73	126640115	A1S_2764	-	^{11 Arg tRNA}
3247581	3247656	-	76	126640115	A1S_2800	-	^{13 Val tRNA}
3247723	3247799	-	77	126640115	A1S_2801	-	^{06 Asp tRNA}
3247839	3247914	-	76	126640115	A1S_2802	-	^{13 Val tRNA}
3247936	3248012	-	77	126640115	A1S_2803	-	^{06 Asp tRNA}
3248060	3248136	-	77	126640115	A1S_2804	-	^{06 Asp tRNA}
3248161	3248236	-	76	126640115	A1S_2805	-	^{13 Val tRNA}
3371424	3371510	-	87	126640115	A1S_2909	-	^{15 Leu tRNA}
3435933	3436066	-	134	126640115	A1S_r10	-	5S ribosomal RNA
3436231	3439133	-	2903	126640115	A1S_r11	-	23S ribosomal RNA
3439475	3439550	-	76	126640115	A1S_2953	-	^{02 Ala tRNA}
3439606	3439682	-	77	126640115	A1S_2954	-	^{14 Ile tRNA}
3439742	3441270	-	1529	126640115	A1S_r12	-	16S ribosomal RNA
3500315	3500448	-	134	126640115	A1S_r13	-	5S ribosomal RNA
3500613	3503515	-	2903	126640115	A1S_r14	-	23S ribosomal RNA
3503857	3503932	-	76	126640115	A1S_2992	-	^{02 Ala tRNA}
3503988	3504064	-	77	126640115	A1S_2993	-	^{14 Ile tRNA}
3504124	3505652	-	1529	126640115	A1S_r15	-	16S ribosomal RNA
3527629	3527705	-	77	126640115	A1S_3015	-	^{11 Arg tRNA}
3531423	3531499	-	77	126640115	A1S_3018	-	^{11 Arg tRNA}
3531539	3531615	-	77	126640115	A1S_3019	-	^{11 Arg tRNA}
3531626	3531716	-	91	126640115	A1S_3020	-	^{08 Ser tRNA}
3697007	3697082	+	76	126640115	A1S_3183	-	^{02 Ala tRNA}
3697108	3697183	+	76	126640115	A1S_3184	-	^{04 Glu tRNA}
3699872	3699947	+	76	126640115	A1S_3188	-	^{04 Glu tRNA}
3699976	3700051	+	76	126640115	A1S_3189	-	^{04 Glu tRNA}
3727433	3727508	-	76	126640115	A1S_3215	-	^{17 Phe tRNA}
3727634	3727709	-	76	126640115	A1S_3216	-	^{17 Phe tRNA}
3744228	3744317	+	90	126640115	A1S_3226	-	^{08 Ser tRNA}
3762439	3762514	+	76	126640115	A1S_3249	-	^{12 Thr tRNA}