Геном прокариот/Материалы:NC 009465

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009465            1022154 bp    DNA     circular BCT 14-AUG-2007
   DEFINITION  Candidatus Vesicomyosocius okutanii HA, complete genome.
   ACCESSION   NC_009465
   VERSION     NC_009465.1  GI:148244169
   KEYWORDS    .
   SOURCE      Candidatus Vesicomyosocius okutanii HA (Candidatus Vesicomyosocius
               okutanii str. HA)
     ORGANISM  Candidatus Vesicomyosocius okutanii HA
               Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing
               symbionts.
   REFERENCE   1
     AUTHORS   Kuwahara,H., Yoshida,T., Takaki,Y., Shimamura,S., Nishi,S.,
               Harada,M., Matsuyama,K., Takishita,K., Kawato,M., Uematsu,K.,
               Fujiwara,Y., Sato,T., Kato,C., Kitagawa,M., Kato,I. and Maruyama,T.
     TITLE     Reduced Genome of the Thioautotrophic Intracellular Symbiont in a
               Deep-Sea Clam, Calyptogena okutanii
     JOURNAL   Curr. Biol. 17 (10), 881-886 (2007)
      PUBMED   17493812
   REFERENCE   2  (bases 1 to 1022154)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (23-MAY-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1022154)
     AUTHORS   Maruyama,T., Kuwahara,H., Takaki,Y., Shimamura,S., Nishi,S.,
               Yoshida,T., Harada,M., Matsuyama,K., Fujiwara,Y., Sato,T., Kato,C.,
               Kitagawa,M. and Kato,I.
     TITLE     Direct Submission
     JOURNAL   Submitted (31-OCT-2006) Tadashi Maruyama, Japan Agency for
               Maine-Earth Science and Technology, Extremobiosphere Research
               Center; 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0026, Japan
               (E-mail:tadashim@jamstec.go.jp, URL:http://www.jamstec.go.jp,
               Tel:81-46-867-9520, Fax:81-46-867-9525)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP009247.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
43138	43213	+	76	148244169	COSY_t01	-	^{12 Thr tRNA}
47513	47588	+	76	148244169	COSY_t02	-	^{17 Phe tRNA}
53629	53705	+	77	148244169	COSY_t03	-	^{16 Met tRNA}
64442	64518	+	77	148244169	COSY_t04	-	^{16 Met tRNA}
121650	121726	-	77	148244169	COSY_t05	-	^{16 Met tRNA}
124668	124742	-	75	148244169	COSY_t06	-	^{05 Gln tRNA}
168277	168350	-	74	148244169	COSY_t07	-	^{19 Cys tRNA}
168402	168477	-	76	148244169	COSY_t08	-	^{01 Gly tRNA}
169152	169228	-	77	148244169	COSY_t09	-	^{11 Arg tRNA}
258203	258287	+	85	148244169	COSY_t10	-	^{15 Leu tRNA}
309468	309543	+	76	148244169	COSY_t11	-	^{02 Ala tRNA}
309560	309634	+	75	148244169	COSY_t12	-	^{04 Glu tRNA}
381581	381656	-	76	148244169	COSY_t13	-	^{09 His tRNA}
381679	381755	-	77	148244169	COSY_t14	-	^{11 Arg tRNA}
381806	381882	-	77	148244169	COSY_t15	-	^{03 Pro tRNA}
402624	402699	+	76	148244169	COSY_t16	-	^{07 Asn tRNA}
409726	409802	-	77	148244169	COSY_t17	-	^{11 Arg tRNA}
410715	410791	+	77	148244169	COSY_t18	-	^{13 Val tRNA}
551241	551329	-	89	148244169	COSY_t19	-	^{08 Ser tRNA}
571185	571260	-	76	148244169	COSY_t20	-	^{10 Lys tRNA}
596571	596647	-	77	148244169	COSY_t21	-	^{11 Arg tRNA}
612096	612169	-	74	148244169	COSY_t22	-	^{03 Pro tRNA}
628751	628827	-	77	148244169	COSY_t23	-	^{06 Asp tRNA}
628839	628914	-	76	148244169	COSY_t24	-	^{13 Val tRNA}
786258	786333	-	76	148244169	COSY_t25	-	^{20 Trp tRNA}
787637	787712	-	76	148244169	COSY_t26	-	^{12 Thr tRNA}
787728	787801	-	74	148244169	COSY_t27	-	^{01 Gly tRNA}
787821	787905	-	85	148244169	COSY_t28	-	^{18 Tyr tRNA}
797611	797703	+	93	148244169	COSY_t29	-	^{08 Ser tRNA}
812023	812107	-	85	148244169	COSY_t30	-	^{15 Leu tRNA}
870408	870495	+	88	148244169	COSY_t31	-	^{15 Leu tRNA}
927485	927574	+	90	148244169	COSY_t32	-	^{08 Ser tRNA}
944354	944477	-	124	148244169	COSY_0907a	-	5S ribosomal RNA
944655	947560	-	2906	148244169	COSY_0907b	-	23S ribosomal RNA
948022	948097	-	76	148244169	COSY_t33	-	^{02 Ala tRNA}
948193	948269	-	77	148244169	COSY_t34	-	^{14 Ile tRNA}
948384	949942	-	1559	148244169	COSY_0907d	-	16S ribosomal RNA
1020279	1020364	-	86	148244169	COSY_t35	-	^{15 Leu tRNA}