Геном прокариот/Материалы:NC 009663

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009663            2562277 bp    DNA     circular BCT 25-JUL-2007
   DEFINITION  Sulfurovum sp. NBC37-1, complete genome.
   ACCESSION   NC_009663
   VERSION     NC_009663.1  GI:152991597
   KEYWORDS    .
   SOURCE      Sulfurovum sp. NBC37-1
     ORGANISM  Sulfurovum sp. NBC37-1
               Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.
   REFERENCE   1
     AUTHORS   Nakagawa,S., Takaki,Y., Shimamura,S., Reysenbach,A.L., Takai,K. and
               Horikoshi,K.
     TITLE     Deep-sea vent epsilon-proteobacterial genomes provide insights into
               emergence of pathogens
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (2007) In press
   REFERENCE   2
     AUTHORS   Nakagawa,S., Takai,K., Inagaki,F., Hirayama,H., Nunoura,T.,
               Horikoshi,K. and Sako,Y.
     TITLE     Distribution, phylogenetic diversity and physiological
               characteristics of epsilon-Proteobacteria in a deep-sea
               hydrothermal field
     JOURNAL   Environ. Microbiol. 7 (10), 1619-1632 (2005)
      PUBMED   16156735
   REFERENCE   3  (bases 1 to 2562277)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (24-JUL-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 2562277)
     AUTHORS   Takaki,Y., Nakagawa,S., Shimamura,S., Takai,K. and Horikoshi,K.
     TITLE     Direct Submission
     JOURNAL   Submitted (25-MAY-2006) Yoshihiro Takaki, Japan Agency for
               Maine-Earth Science and Technology, Extremobiosphere Research
               Center; 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0026, Japan
               (E-mail:takakiy@jamstec.go.jp, URL:http://www.jamstec.go.jp,
               Tel:81-46-867-9648, Fax:81-46-867-9645)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP009179.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
37472	38980	+	1509	152991597	SUN_r01	-	16S ribosomal RNA
39108	39183	+	76	152991597	SUN_t01	-	^{02 Ala tRNA}
39618	42493	+	2876	152991597	SUN_r02	-	23S ribosomal RNA
42683	42798	+	116	152991597	SUN_r03	-	5S ribosomal RNA
122127	122202	+	76	152991597	SUN_t02	-	^{12 Thr tRNA}
122258	122342	+	85	152991597	SUN_t03	-	^{18 Tyr tRNA}
122365	122441	+	77	152991597	SUN_t04	-	^{01 Gly tRNA}
122620	122694	+	75	152991597	SUN_t05	-	^{12 Thr tRNA}
124314	124389	+	76	152991597	SUN_t06	-	^{20 Trp tRNA}
531257	531334	+	78	152991597	SUN_t07	-	^{03 Pro tRNA}
556522	558030	+	1509	152991597	SUN_r04	-	16S ribosomal RNA
558162	558238	+	77	152991597	SUN_t08	-	^{14 Ile tRNA}
558576	561451	+	2876	152991597	SUN_r05	-	23S ribosomal RNA
561641	561756	+	116	152991597	SUN_r06	-	5S ribosomal RNA
703018	703108	+	91	152991597	SUN_t09	-	^{08 Ser tRNA}
1334883	1334958	+	76	152991597	SUN_t10	-	^{11 Arg tRNA}
1396907	1396989	+	83	152991597	SUN_t11	-	^{15 Leu tRNA}
1397032	1397108	+	77	152991597	SUN_t12	-	^{01 Gly tRNA}
1397131	1397205	+	75	152991597	SUN_t13	-	^{01 Gly tRNA}
1417606	1417682	+	77	152991597	SUN_t14	-	^{16 Met tRNA}
1487906	1487980	+	75	152991597	SUN_t15	-	^{05 Gln tRNA}
1488039	1488115	+	77	152991597	SUN_t16	-	^{16 Met tRNA}
1662067	1662141	-	75	152991597	SUN_t17	-	^{07 Asn tRNA}
1849746	1849821	+	76	152991597	SUN_t18	-	^{10 Lys tRNA}
1849827	1849902	+	76	152991597	SUN_t19	-	^{13 Val tRNA}
1849916	1849992	+	77	152991597	SUN_t20	-	^{06 Asp tRNA}
1850102	1850177	+	76	152991597	SUN_t21	-	^{10 Lys tRNA}
1850214	1850289	+	76	152991597	SUN_t22	-
1850300	1850375	+	76	152991597	SUN_t23	-	^{13 Val tRNA}
1850527	1850603	+	77	152991597	SUN_t24	-	^{06 Asp tRNA}
1850644	1850730	+	87	152991597	SUN_t25	-	^{15 Leu tRNA}
1937989	1938073	-	85	152991597	SUN_t26	-	^{15 Leu tRNA}
2035273	2035349	-	77	152991597	SUN_t27	-	^{16 Met tRNA}
2291884	2291959	+	76	152991597	SUN_t28	-	^{17 Phe tRNA}
2310288	2310364	-	77	152991597	SUN_t29	-	^{11 Arg tRNA}
2353000	2353074	+	75	152991597	SUN_t30	-	^{04 Glu tRNA}
2353102	2353176	+	75	152991597	SUN_t31	-	^{04 Glu tRNA}
2359366	2359441	-	76	152991597	SUN_t32	-	^{02 Ala tRNA}
2390926	2391041	-	116	152991597	SUN_r07	-	5S ribosomal RNA
2391231	2394106	-	2876	152991597	SUN_r08	-	23S ribosomal RNA
2394541	2394616	-	76	152991597	SUN_t33	-	^{02 Ala tRNA}
2394744	2396252	-	1509	152991597	SUN_r09	-	16S ribosomal RNA
2420551	2420638	+	88	152991597	SUN_t34	-	^{08 Ser tRNA}
2453204	2453280	+	77	152991597	SUN_t35	-	^{03 Pro tRNA}
2453323	2453398	+	76	152991597	SUN_t36	-	^{09 His tRNA}
2453435	2453511	+	77	152991597	SUN_t37	-	^{11 Arg tRNA}
2453541	2453617	+	77	152991597	SUN_t38	-	^{11 Arg tRNA}
2453642	2453726	+	85	152991597	SUN_t39	-	^{15 Leu tRNA}
2506510	2506585	+	76	152991597	SUN_t40	-	^{13 Val tRNA}
2520577	2520651	+	75	152991597	SUN_t41	-	^{01 Gly tRNA}
2520696	2520782	+	87	152991597	SUN_t42	-	^{15 Leu tRNA}
2520795	2520870	+	76	152991597	SUN_t43	-	^{19 Cys tRNA}
2520922	2521009	+	88	152991597	SUN_t44	-	^{08 Ser tRNA}