Геном прокариот/Материалы:NC 009801

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009801            4979619 bp    DNA     circular BCT 14-SEP-2007
   DEFINITION  Escherichia coli E24377A, complete genome.
   ACCESSION   NC_009801
   VERSION     NC_009801.1  GI:157154711
   KEYWORDS    .
   SOURCE      Escherichia coli E24377A
     ORGANISM  Escherichia coli E24377A
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Escherichia.
   REFERENCE   1  (bases 1 to 4979619)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (13-SEP-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   2  (bases 1 to 4979619)
     AUTHORS   Rasko,D.A., Rosovitz,M.J., Brinkley,C., Myers,G.S.A., Seshadri,R.,
               Cer,R.Z., Jiang,L. and Ravel,J.
     TITLE     Direct Submission
     JOURNAL   Submitted (13-AUG-2007) The Institute for Genomic Research, 9712
               Medical Center Dr., Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000800.
               Source DNA and bacteria available from Jacques Ravel
               (jravel@tigr.org).
               COMPLETENESS: full length.

Расположение РНК править

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
225632	227173	+	1542	157154711	EcE24377A_5003	-	16S ribosomal RNA
227242	227318	+	77	157154711	EcE24377A_5004	-	^{14 Ile tRNA}
227361	227436	+	76	157154711	EcE24377A_5005	-	^{02 Ala tRNA}
227600	230523	+	2924	157154711	EcE24377A_5006	-	23S ribosomal RNA
230616	230735	+	120	157154711	EcE24377A_5007	-	5S ribosomal RNA
230927	231003	+	77	157154711	EcE24377A_5008	-	^{06 Asp tRNA}
239151	239227	+	77	157154711	EcE24377A_5009	-	^{06 Asp tRNA}
295502	295577	+	76	157154711	EcE24377A_5010	-	^{12 Thr tRNA}
320696	320775	+	80	157154711	EcE24377A_5011	-	Xaa tRNA
381414	381494	+	81	157154711	EcE24377A_5012	-	Xaa tRNA
599636	599712	+	77	157154711	EcE24377A_5013	-	^{11 Arg tRNA}
719921	719995	-	75	157154711	EcE24377A_5014	-	^{05 Gln tRNA}
720044	720120	-	77	157154711	EcE24377A_5015	-	^{16 Met tRNA}
720136	720210	-	75	157154711	EcE24377A_5016	-	^{05 Gln tRNA}
720245	720319	-	75	157154711	EcE24377A_5017	-	^{05 Gln tRNA}
720343	720427	-	85	157154711	EcE24377A_5018	-	^{15 Leu tRNA}
720436	720512	-	77	157154711	EcE24377A_5019	-	^{16 Met tRNA}
800448	800523	+	76	157154711	EcE24377A_5020	-	^{10 Lys tRNA}
800659	800734	+	76	157154711	EcE24377A_5021	-	^{13 Val tRNA}
800738	800813	+	76	157154711	EcE24377A_5022	-	^{10 Lys tRNA}
800960	801035	+	76	157154711	EcE24377A_5023	-	^{10 Lys tRNA}
801069	801144	+	76	157154711	EcE24377A_5024	-	^{10 Lys tRNA}
975294	975381	-	88	157154711	EcE24377A_5025	-	^{08 Ser tRNA}
1110286	1110373	-	88	157154711	EcE24377A_5026	-	^{08 Ser tRNA}
1175030	1175117	-	88	157154711	EcE24377A_5027	-	^{08 Ser tRNA}
1280134	1280209	+	76	157154711	EcE24377A_5028	-	^{16 Met tRNA}
1280290	1280365	+	76	157154711	EcE24377A_5029	-	^{12 Thr tRNA}
1280369	1280443	+	75	157154711	EcE24377A_5030	-	^{01 Gly tRNA}
1377482	1377566	-	85	157154711	EcE24377A_5031	-	^{18 Tyr tRNA}
1377600	1377684	-	85	157154711	EcE24377A_5032	-	^{18 Tyr tRNA}
1437390	1437465	+	76	157154711	EcE24377A_5033	-	^{12 Thr tRNA}
1437469	1437543	+	75	157154711	EcE24377A_5034	-	^{01 Gly tRNA}
1872253	1872329	+	77	157154711	EcE24377A_5035	-	^{13 Val tRNA}
1872334	1872410	+	77	157154711	EcE24377A_5036	-	^{13 Val tRNA}
2118636	2118722	-	87	157154711	EcE24377A_5037	-	^{15 Leu tRNA}
2118735	2118808	-	74	157154711	EcE24377A_5038	-	^{19 Cys tRNA}
2118863	2118938	-	76	157154711	EcE24377A_5039	-	^{01 Gly tRNA}
2221294	2221383	-	90	157154711	EcE24377A_5040	-	^{08 Ser tRNA}
2222375	2222450	+	76	157154711	EcE24377A_5041	-	^{07 Asn tRNA}
2235854	2235929	-	76	157154711	EcE24377A_5042	-	^{07 Asn tRNA}
2237678	2237753	+	76	157154711	EcE24377A_5043	-	^{07 Asn tRNA}
2240087	2240162	+	76	157154711	EcE24377A_5044	-	^{07 Asn tRNA}
2474500	2474576	+	77	157154711	EcE24377A_5045	-	^{03 Pro tRNA}
2636832	2636906	+	75	157154711	EcE24377A_5046	-	^{11 Arg tRNA}
2680197	2680272	-	76	157154711	EcE24377A_5047	-	^{02 Ala tRNA}
2680312	2680387	-	76	157154711	EcE24377A_5048	-	^{02 Ala tRNA}
2683087	2683162	+	76	157154711	EcE24377A_5049	-	^{13 Val tRNA}
2683207	2683282	+	76	157154711	EcE24377A_5050	-	^{13 Val tRNA}
2683329	2683404	+	76	157154711	EcE24377A_5051	-	^{13 Val tRNA}
2683409	2683484	+	76	157154711	EcE24377A_5052	-	^{10 Lys tRNA}
2875695	2875814	-	120	157154711	EcE24377A_5053	-	5S ribosomal RNA
2875908	2878833	-	2926	157154711	EcE24377A_5054	-	23S ribosomal RNA
2878997	2879072	-	76	157154711	EcE24377A_5055	-	^{04 Glu tRNA}
2879244	2880785	-	1542	157154711	EcE24377A_5056	-	16S ribosomal RNA
2905926	2906288	+	363	157154711	EcE24377A_5057	-	10Sa RNA (tmRNA)
2946286	2946361	-	76	157154711	EcE24377A_5058	-	^{16 Met tRNA}
2978413	2978489	-	77	157154711	EcE24377A_5059	-	^{11 Arg tRNA}
2978553	2978629	-	77	157154711	EcE24377A_5060	-	^{11 Arg tRNA}
2978693	2978769	-	77	157154711	EcE24377A_5061	-	^{11 Arg tRNA}
2978967	2979043	-	77	157154711	EcE24377A_5062	-	^{11 Arg tRNA}
2979047	2979139	-	93	157154711	EcE24377A_5063	-	^{08 Ser tRNA}
3127302	3127378	+	77	157154711	EcE24377A_5064	-	^{16 Met tRNA}
3127412	3127488	+	77	157154711	EcE24377A_5065	-	^{16 Met tRNA}
3127521	3127597	+	77	157154711	EcE24377A_5066	-	^{16 Met tRNA}
3202626	3202699	-	74	157154711	EcE24377A_5067	-	^{01 Gly tRNA}
3325510	3325585	+	76	157154711	EcE24377A_5068	-	^{17 Phe tRNA}
3397364	3397442	+	79	157154711	EcE24377A_5069	-	Xaa tRNA
3545264	3545339	+	76	157154711	EcE24377A_5070	-	^{16 Met tRNA}
3655517	3655593	-	77	157154711	EcE24377A_5071	-	^{16 Met tRNA}
3659376	3659462	-	87	157154711	EcE24377A_5072	-	^{15 Leu tRNA}
3753385	3753460	-	76	157154711	EcE24377A_5073	-	^{12 Thr tRNA}
3753473	3753592	-	120	157154711	EcE24377A_5074	-	5S ribosomal RNA
3753685	3756608	-	2924	157154711	EcE24377A_5075	-	23S ribosomal RNA
3756772	3756847	-	76	157154711	EcE24377A_5076	-	^{02 Ala tRNA}
3756890	3756966	-	77	157154711	EcE24377A_5077	-	^{14 Ile tRNA}
3757035	3758576	-	1542	157154711	EcE24377A_5078	-	16S ribosomal RNA
4022726	4022802	-	77	157154711	EcE24377A_5079	-	^{03 Pro tRNA}
4152846	4152936	+	91	157154711	EcE24377A_5080	-	Sec tRNA
4263705	4265246	+	1542	157154711	EcE24377A_5081	-	16S ribosomal RNA
4265332	4265407	+	76	157154711	EcE24377A_5082	-	^{04 Glu tRNA}
4265581	4268504	+	2924	157154711	EcE24377A_5083	-	23S ribosomal RNA
4268597	4268716	+	120	157154711	EcE24377A_5084	-	5S ribosomal RNA
4268769	4268845	+	77	157154711	EcE24377A_5085	-	^{06 Asp tRNA}
4268854	4268929	+	76	157154711	EcE24377A_5086	-	^{20 Trp tRNA}
4304216	4304292	+	77	157154711	EcE24377A_5087	-	^{11 Arg tRNA}
4304351	4304426	+	76	157154711	EcE24377A_5088	-	^{09 His tRNA}
4304447	4304533	+	87	157154711	EcE24377A_5089	-	^{15 Leu tRNA}
4304576	4304652	+	77	157154711	EcE24377A_5090	-	^{03 Pro tRNA}
4360914	4362454	+	1541	157154711	EcE24377A_5091	-	16S ribosomal RNA
4362523	4362599	+	77	157154711	EcE24377A_5092	-	^{14 Ile tRNA}
4362642	4362717	+	76	157154711	EcE24377A_5093	-	^{02 Ala tRNA}
4362881	4365804	+	2924	157154711	EcE24377A_5094	-	23S ribosomal RNA
4365898	4366017	+	120	157154711	EcE24377A_5095	-	5S ribosomal RNA
4503771	4505312	+	1542	157154711	EcE24377A_5096	-	16S ribosomal RNA
4505398	4505473	+	76	157154711	EcE24377A_5097	-	^{04 Glu tRNA}
4505647	4508570	+	2924	157154711	EcE24377A_5098	-	23S ribosomal RNA
4508663	4508782	+	120	157154711	EcE24377A_5099	-	5S ribosomal RNA
4512414	4512489	+	76	157154711	EcE24377A_5100	-	^{12 Thr tRNA}
4512498	4512582	+	85	157154711	EcE24377A_5101	-	^{18 Tyr tRNA}
4512699	4512773	+	75	157154711	EcE24377A_5102	-	^{01 Gly tRNA}
4512780	4512855	+	76	157154711	EcE24377A_5103	-	^{12 Thr tRNA}
4545152	4546693	+	1542	157154711	EcE24377A_5104	-	16S ribosomal RNA
4546779	4546854	+	76	157154711	EcE24377A_5105	-	^{04 Glu tRNA}
4547028	4549951	+	2924	157154711	EcE24377A_5106	-	23S ribosomal RNA
4550044	4550163	+	120	157154711	EcE24377A_5107	-	5S ribosomal RNA
4693953	4694028	-	76	157154711	EcE24377A_5108	-	^{17 Phe tRNA}
4724485	4724560	+	76	157154711	EcE24377A_5109	-	^{01 Gly tRNA}
4724597	4724672	+	76	157154711	EcE24377A_5110	-	^{01 Gly tRNA}
4724708	4724783	+	76	157154711	EcE24377A_5111	-	^{01 Gly tRNA}
4831854	4831938	+	85	157154711	EcE24377A_5112	-	^{15 Leu tRNA}
4945424	4945510	-	87	157154711	EcE24377A_5113	-	^{15 Leu tRNA}
4945545	4945631	-	87	157154711	EcE24377A_5114	-	^{15 Leu tRNA}
4945660	4945746	-	87	157154711	EcE24377A_5115	-	^{15 Leu tRNA}