Геном прокариот/Материалы:NC 000919

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_000919            1138011 bp    DNA     circular BCT 03-DEC-2005
   DEFINITION  Treponema pallidum subsp. pallidum str. Nichols, complete genome.
   ACCESSION   NC_000919
   VERSION     NC_000919.1  GI:15638995
   KEYWORDS    .
   SOURCE      Treponema pallidum subsp. pallidum str. Nichols
     ORGANISM  Treponema pallidum subsp. pallidum str. Nichols
               Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.
   REFERENCE   1  (bases 1 to 1138011)
     AUTHORS   Fraser,C.M., Norris,S.J., Weinstock,G.M., White,O., Sutton,G.G.,
               Dodson,R., Gwinn,M., Hickey,E.K., Clayton,R., Ketchum,K.A.,
               Sodergren,E., Hardham,J.M., McLeod,M.P., Salzberg,S., Peterson,J.,
               Khalak,H., Richardson,D., Howell,J.K., Chidambaram,M.,
               Utterback,T., McDonald,L., Artiach,P., Bowman,C., Cotton,M.D.,
               Fujii,C., Garland,S., Hatch,B., Horst,K., Roberts,K., Watthey,L.,
               Weidman,J., Smith,H.O. and Venter,J.C.
     TITLE     Complete genome sequence of Treponema pallidum, the syphilis
               spirochete
     JOURNAL   Science 281 (5375), 375-388 (1998)
      PUBMED   9665876
   REFERENCE   2  (bases 1 to 1138011)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (18-SEP-2001) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1138011)
     AUTHORS   Fraser,C.M., Norris,S.J., Weinstock,G.M., White,O., Sutton,G.G.,
               Dodson,R., Gwinn,M., Hickey,E.K., Clayton,R., Ketchum,K.A.,
               Sodergren,E., Hardham,J.M., McLeod,M.P., Salzberg,S., Peterson,J.,
               Khalak,H., Richardson,D., Howell,J.K., Chidambaram,M.,
               Utterback,T., McDonald,L., Artiach,P., Bowman,C., Cotton,M.D.,
               Fujii,C., Garland,S., Hatch,B., Horst,K., Roberts,K., Watthey,L.,
               Weidman,J., Smith,H.O. and Venter,J.C.
     TITLE     Direct Submission
     JOURNAL   Submitted (06-MAR-1998) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE000520.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
24338	24425	-	88	15638995	TPt01	-	^{08 Ser tRNA}
24482	24570	-	89	15638995	TPt02	-	^{08 Ser tRNA}
24628	24701	-	74	15638995	TPt03	-	^{11 Arg tRNA}
24733	24819	-	87	15638995	TPt04	-	^{08 Ser tRNA}
24860	24944	-	85	15638995	TPt05	-	^{08 Ser tRNA}
124900	124970	+	71	15638995	TPt06	-	^{05 Gln tRNA}
124980	125051	+	72	15638995	TPt07	-	^{04 Glu tRNA}
125088	125159	+	72	15638995	TPt08	-	^{04 Glu tRNA}
156596	156668	+	73	15638995	TPt09	-	^{13 Val tRNA}
167949	168030	-	82	15638995	TPt10	-	^{15 Leu tRNA}
189892	189964	+	73	15638995	TPt11	-	^{16 Met tRNA}
230162	231656	+	1495	15638995	TPr01	-	Ribosomal RNA
231761	231834	+	74	15638995	TPt12	-	^{14 Ile tRNA}
231950	234850	+	2901	15638995	TPr02	-	Ribosomal RNA
234900	234985	+	86	15638995	TPr03	-	Ribosomal RNA
241889	241961	+	73	15638995	TPt13	-	^{12 Thr tRNA}
242215	242287	+	73	15638995	TPt14	-	^{20 Trp tRNA}
278596	280090	+	1495	15638995	TPr04	-	Ribosomal RNA
280194	280267	+	74	15638995	TPt15	-	^{02 Ala tRNA}
280384	283284	+	2901	15638995	TPr05	-	Ribosomal RNA
283340	283425	+	86	15638995	TPr06	-	Ribosomal RNA
351812	351894	-	83	15638995	TPt16	-	^{15 Leu tRNA}
353847	353918	-	72	15638995	TPt17	-	^{01 Gly tRNA}
395663	395735	+	73	15638995	TPt18	-	^{05 Gln tRNA}
523524	523598	+	75	15638995	TPt19	-	^{12 Thr tRNA}
523608	523689	+	82	15638995	TPt20	-	^{18 Tyr tRNA}
540756	540828	+	73	15638995	TPt21	-	^{10 Lys tRNA}
540888	540968	+	81	15638995	TPt22	-	^{15 Leu tRNA}
540979	541050	+	72	15638995	TPt23	-	^{01 Gly tRNA}
581429	581501	+	73	15638995	TPt24	-	^{07 Asn tRNA}
598767	598838	-	72	15638995	TPt25	-	^{19 Cys tRNA}
642154	642226	+	73	15638995	TPt26	-	^{11 Arg tRNA}
642240	642311	-	72	15638995	TPt27	-	^{03 Pro tRNA}
642363	642436	-	74	15638995	TPt28	-	^{06 Asp tRNA}
642506	642578	-	73	15638995	TPt29	-	^{16 Met tRNA}
658290	658363	+	74	15638995	TPt30	-	^{11 Arg tRNA}
697384	697457	-	74	15638995	TPt31	-	^{11 Arg tRNA}
697472	697543	-	72	15638995	TPt32	-	^{09 His tRNA}
697680	697752	+	73	15638995	TPt33	-	^{17 Phe tRNA}
729844	729916	+	73	15638995	TPt34	-	^{03 Pro tRNA}
734239	734312	+	74	15638995	TPt35	-	^{11 Arg tRNA}
742467	742538	+	72	15638995	TPt36	-	^{13 Val tRNA}
760021	760094	-	74	15638995	TPt37	-	^{16 Met tRNA}
767249	767322	+	74	15638995	TPt38	-	^{03 Pro tRNA}
841806	841878	-	73	15638995	TPt39	-	^{10 Lys tRNA}
842022	842105	+	84	15638995	TPt40	-	^{15 Leu tRNA}
1002824	1002896	+	73	15638995	TPt41	-	^{02 Ala tRNA}
1005434	1005506	-	73	15638995	TPt42	-	^{12 Thr tRNA}
1017521	1017594	+	74	15638995	TPt43	-	^{13 Val tRNA}
1078378	1078463	-	86	15638995	TPt44	-	^{15 Leu tRNA}
1082510	1082583	-	74	15638995	TPt45	-	^{02 Ala tRNA}