Материалы:NC 002505

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_002505            2961149 bp    DNA     circular BCT 18-JAN-2006
   DEFINITION  Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete
               sequence.
   ACCESSION   NC_002505
   VERSION     NC_002505.1  GI:15640032
   KEYWORDS    .
   SOURCE      Vibrio cholerae O1 biovar eltor str. N16961
     ORGANISM  Vibrio cholerae O1 biovar eltor str. N16961
               Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
               Vibrionaceae; Vibrio.
   REFERENCE   1  (bases 1 to 2961149)
     AUTHORS   Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L.,
               Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A.,
               Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D.,
               Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I.,
               Sellers,P., McDonald,L., Utterback,T., Fleishmann,R.D.,
               Nierman,W.C., White,O., Salzberg,S.L., Smith,H.O., Colwell,R.R.,
               Mekalanos,J.J., Venter,J.C. and Fraser,C.M.
     TITLE     DNA sequence of both chromosomes of the cholera pathogen Vibrio
               cholerae
     JOURNAL   Nature 406 (6795), 477-483 (2000)
      PUBMED   10952301
   REFERENCE   2  (bases 1 to 2961149)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (18-SEP-2001) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2961149)
     AUTHORS   Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L.,
               Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A.,
               Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D.,
               Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I.,
               Sellers,P., McDonald,L., Utterback,T., Fleishmann,R.D.,
               Nierman,W.C., White,O., Salzberg,S.L., Smith,H.O., Colwell,R.R.,
               Mekalanos,J.J., Venter,J.C. and Fraser,C.M.
     TITLE     Direct Submission
     JOURNAL   Submitted (14-JUN-2000) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE003852.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
53823	55357	+	1535	15640032	VCr001	-	16S ribosomal RNA
55421	55496	+	76	15640032	VCt001	-	^{02 Ala tRNA}
55784	58670	+	2887	15640032	VCr002	-	23S ribosomal RNA
58798	58915	+	118	15640032	VCr003	-	5S ribosomal RNA
58941	59017	+	77	15640032	VCt002	-	^{06 Asp tRNA}
59047	59123	+	77	15640032	VCt003	-	^{20 Trp tRNA}
151059	152593	+	1535	15640032	VCr004	-	16S ribosomal RNA
152663	152738	+	76	15640032	VCt004	-	^{04 Glu tRNA}
153026	155912	+	2887	15640032	VCr005	-	23S ribosomal RNA
156041	156158	+	118	15640032	VCr006	-	5S ribosomal RNA
156206	156296	+	91	15640032	VCt005	-	^{08 Ser tRNA}
167187	167263	+	77	15640032	VCt006	-	^{11 Arg tRNA}
167299	167374	+	76	15640032	VCt007	-	^{09 His tRNA}
167436	167512	+	77	15640032	VCt008	-	^{03 Pro tRNA}
167583	167658	+	76	15640032	VCt009	-	^{09 His tRNA}
167720	167796	+	77	15640032	VCt010	-	^{03 Pro tRNA}
324147	325681	+	1535	15640032	VCr007	-	16S ribosomal RNA
325745	325821	+	77	15640032	VCt011	-	^{14 Ile tRNA}
325830	325905	+	76	15640032	VCt012	-	^{02 Ala tRNA}
326193	329079	+	2887	15640032	VCr008	-	23S ribosomal RNA
329207	329324	+	118	15640032	VCr009	-	5S ribosomal RNA
329350	329426	+	77	15640032	VCt013	-	^{06 Asp tRNA}
334819	334894	+	76	15640032	VCt014	-	^{12 Thr tRNA}
334930	335014	+	85	15640032	VCt015	-	^{18 Tyr tRNA}
335050	335124	+	75	15640032	VCt016	-	^{01 Gly tRNA}
335138	335213	+	76	15640032	VCt017	-	^{12 Thr tRNA}
361861	361936	+	76	15640032	VCt018	-	^{01 Gly tRNA}
361971	362046	+	76	15640032	VCt019	-	^{01 Gly tRNA}
362203	362278	+	76	15640032	VCt020	-	^{01 Gly tRNA}
362318	362394	+	77	15640032	VCt021	-	^{16 Met tRNA}
362429	362504	+	76	15640032	VCt022	-	^{01 Gly tRNA}
362691	362767	+	77	15640032	VCt023	-	^{16 Met tRNA}
362810	362886	+	77	15640032	VCt024	-	^{16 Met tRNA}
362929	363005	+	77	15640032	VCt025	-	^{16 Met tRNA}
401751	403286	+	1536	15640032	VCr010	-	16S ribosomal RNA
403350	403426	+	77	15640032	VCt026	-	^{14 Ile tRNA}
403435	403511	+	77	15640032	VCt027	-	^{02 Ala tRNA}
403799	406685	+	2887	15640032	VCr011	-	23S ribosomal RNA
406813	406930	+	118	15640032	VCr012	-	5S ribosomal RNA
406956	407032	+	77	15640032	VCt028	-	^{06 Asp tRNA}
478401	478476	-	76	15640032	VCt029	-	^{07 Asn tRNA}
478491	478566	-	76	15640032	VCt030	-	^{12 Thr tRNA}
478595	478670	-	76	15640032	VCt031	-	^{07 Asn tRNA}
478686	478761	-	76	15640032	VCt032	-	^{12 Thr tRNA}
478803	478878	-	76	15640032	VCt033	-	^{17 Phe tRNA}
481175	481250	-	76	15640032	VCt034	-	^{07 Asn tRNA}
481288	481363	-	76	15640032	VCt035	-	^{17 Phe tRNA}
481374	481449	-	76	15640032	VCt036	-	^{12 Thr tRNA}
481498	481573	-	76	15640032	VCt037	-	^{17 Phe tRNA}
550187	550262	-	76	15640032	VCt038	-	^{16 Met tRNA}
580968	581060	+	93	15640032	VCt039	-	^{08 Ser tRNA}
581094	581170	+	77	15640032	VCt040	-	^{11 Arg tRNA}
581193	581285	+	93	15640032	VCt041	-	^{08 Ser tRNA}
581352	581428	+	77	15640032	VCt042	-	^{11 Arg tRNA}
581484	581560	+	77	15640032	VCt043	-	^{11 Arg tRNA}
581633	581709	+	77	15640032	VCt044	-	^{11 Arg tRNA}
581766	581842	+	77	15640032	VCt045	-	^{11 Arg tRNA}
581914	581990	+	77	15640032	VCt046	-	^{11 Arg tRNA}
682928	683011	+	84	15640032	VCt047	-	^{15 Leu tRNA}
683065	683141	+	77	15640032	VCt048	-	^{16 Met tRNA}
762775	764309	+	1535	15640032	VCr013	-	16S ribosomal RNA
764379	764454	+	76	15640032	VCt049	-	^{04 Glu tRNA}
764742	767627	+	2886	15640032	VCr014	-	23S ribosomal RNA
767755	767872	+	118	15640032	VCr015	-	5S ribosomal RNA
767948	768024	+	77	15640032	VCt050	-	^{06 Asp tRNA}
973171	973255	-	85	15640032	VCt051	-	^{18 Tyr tRNA}
973340	973424	-	85	15640032	VCt052	-	^{18 Tyr tRNA}
973509	973593	-	85	15640032	VCt053	-	^{18 Tyr tRNA}
973679	973763	-	85	15640032	VCt054	-	^{18 Tyr tRNA}
1087128	1087203	-	76	15640032	VCt055	-	^{07 Asn tRNA}
1293914	1293987	+	74	15640032	VCt056	-	^{19 Cys tRNA}
1293990	1294065	+	76	15640032	VCt057	-	^{01 Gly tRNA}
1294130	1294216	+	87	15640032	VCt058	-	^{15 Leu tRNA}
1294227	1294302	+	76	15640032	VCt059	-	^{01 Gly tRNA}
1712295	1712371	-	77	15640032	VCt060	-	^{13 Val tRNA}
1712393	1712469	-	77	15640032	VCt061	-	^{13 Val tRNA}
1895692	1895779	+	88	15640032	VCt062	-	^{08 Ser tRNA}
2093320	2093396	-	77	15640032	VCt063	-	^{11 Arg tRNA}
2199243	2199319	+	77	15640032	VCt064	-	^{03 Pro tRNA}
2199484	2199574	+	91	15640032	VCt065	-	^{08 Ser tRNA}
2330906	2330982	+	77	15640032	VCt066	-	^{16 Met tRNA}
2331011	2331096	+	86	15640032	VCt067	-	^{15 Leu tRNA}
2331121	2331205	+	85	15640032	VCt068	-	^{15 Leu tRNA}
2331233	2331307	+	75	15640032	VCt069	-	^{05 Gln tRNA}
2331385	2331461	+	77	15640032	VCt070	-	^{16 Met tRNA}
2331485	2331570	+	86	15640032	VCt071	-	^{15 Leu tRNA}
2331588	2331662	+	75	15640032	VCt072	-	^{05 Gln tRNA}
2331704	2331788	+	85	15640032	VCt073	-	^{15 Leu tRNA}
2331815	2331889	+	75	15640032	VCt074	-	^{05 Gln tRNA}
2331931	2332015	+	85	15640032	VCt075	-	^{15 Leu tRNA}
2332041	2332117	+	77	15640032	VCt076	-	^{16 Met tRNA}
2332140	2332225	+	86	15640032	VCt077	-	^{15 Leu tRNA}
2332243	2332317	+	75	15640032	VCt078	-	^{05 Gln tRNA}
2332361	2332445	+	85	15640032	VCt079	-	^{15 Leu tRNA}
2332484	2332558	+	75	15640032	VCt080	-	^{05 Gln tRNA}
2332600	2332684	+	85	15640032	VCt081	-	^{15 Leu tRNA}
2375624	2375700	-	77	15640032	VCt082	-	^{03 Pro tRNA}
2675957	2676080	-	124	15640032	VCr025	-	5S ribosomal RNA
2676117	2676192	-	76	15640032	VCt083	-	^{12 Thr tRNA}
2676241	2676358	-	118	15640032	VCr016	-	5S ribosomal RNA
2676486	2679372	-	2887	15640032	VCr017	-	23S ribosomal RNA
2679660	2679735	-	76	15640032	VCt084	-	^{02 Ala tRNA}
2679744	2679820	-	77	15640032	VCt085	-	^{14 Ile tRNA}
2679884	2681418	-	1535	15640032	VCr018	-	16S ribosomal RNA
2683338	2683422	-	85	15640032	VCt086	-	^{15 Leu tRNA}
2927796	2927872	-	77	15640032	VCt087	-	^{06 Asp tRNA}
2927898	2928015	-	118	15640032	VCr019	-	5S ribosomal RNA
2928143	2931031	-	2889	15640032	VCr020	-	23S ribosomal RNA
2931319	2931394	-	76	15640032	VCt088	-	^{02 Ala tRNA}
2931400	2931475	-	76	15640032	VCt089	-	^{13 Val tRNA}
2931506	2931580	-	75	15640032	VCt090	-	^{10 Lys tRNA}
2931600	2931675	-	76	15640032	VCt091	-	^{04 Glu tRNA}
2931745	2933279	-	1535	15640032	VCr021	-	16S ribosomal RNA
2933646	2933763	-	118	15640032	VCr022	-	5S ribosomal RNA
2933891	2936778	-	2888	15640032	VCr023	-	23S ribosomal RNA
2937121	2937196	-	76	15640032	VCt092	-	^{13 Val tRNA}
2937227	2937301	-	75	15640032	VCt093	-	^{10 Lys tRNA}
2937321	2937396	-	76	15640032	VCt094	-	^{04 Glu tRNA}
2937466	2939001	-	1536	15640032	VCr024	-	16S ribosomal RNA