Геном прокариот/Материалы:NC 002928

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_002928            4773551 bp    DNA     circular BCT 18-JAN-2006
   DEFINITION  Bordetella parapertussis 12822, complete genome.
   ACCESSION   NC_002928
   VERSION     NC_002928.3  GI:33594723
   KEYWORDS    complete genome.
   SOURCE      Bordetella parapertussis 12822
     ORGANISM  Bordetella parapertussis 12822
               Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
               Alcaligenaceae; Bordetella.
   REFERENCE   1  (bases 1 to 4773551)
     AUTHORS   Parkhill,J., Sebaihia,M., Preston,A., Murphy,L.D., Thomson,N.,
               Harris,D.E., Holden,M.T., Churcher,C.M., Bentley,S.D.,
               Mungall,K.L., Cerdeno-Tarraga,A.M., Temple,L., James,K., Harris,B.,
               Quail,M.A., Achtman,M., Atkin,R., Baker,S., Basham,D., Bason,N.,
               Cherevach,I., Chillingworth,T., Collins,M., Cronin,A., Davis,P.,
               Doggett,J., Feltwell,T., Goble,A., Hamlin,N., Hauser,H.,
               Holroyd,S., Jagels,K., Leather,S., Moule,S., Norberczak,H.,
               O'Neil,S., Ormond,D., Price,C., Rabbinowitsch,E., Rutter,S.,
               Sanders,M., Saunders,D., Seeger,K., Sharp,S., Simmonds,M.,
               Skelton,J., Squares,R., Squares,S., Stevens,K., Unwin,L.,
               Whitehead,S., Barrell,B.G. and Maskell,D.J.
     TITLE     Comparative analysis of the genome sequences of Bordetella
               pertussis, Bordetella parapertussis and Bordetella bronchiseptica
     JOURNAL   Nat. Genet. 35 (1), 32-40 (2003)
      PUBMED   12910271
   REFERENCE   2  (bases 1 to 4773551)
     AUTHORS   Sebaihia,M.
     TITLE     Direct Submission
     JOURNAL   Submitted (06-AUG-2003) Sanger Institute, Wellcome Trust Genome
               Campus, Hinxton, Cambridge CB10 1SA, United Kingdom
   REFERENCE   3  (bases 1 to 4773551)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from BX470249.
               On Aug 12, 2003 this sequence version replaced gi:27532921.
               COMPLETENESS: full length.

Расположение РНК править

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
6281	6367	+	87	33594723	BPPt01	-	^{18 Tyr tRNA}
6556	6629	+	74	33594723	BPPt02	-	^{01 Gly tRNA}
6636	6710	+	75	33594723	BPPt03	-	^{12 Thr tRNA}
8068	8143	+	76	33594723	BPPt04	-	^{20 Trp tRNA}
325800	325876	+	77	33594723	BPPt05	-	^{03 Pro tRNA}
400377	400452	-	76	33594723	BPPt06	-	^{17 Phe tRNA}
529388	529472	-	85	33594723	BPPt07	-	^{15 Leu tRNA}
542793	542866	+	74	33594723	BPPt08	-	^{01 Gly tRNA}
878842	878918	+	77	33594723	BPPt09	-	^{05 Gln tRNA}
1197715	1197791	-	77	33594723	BPPt10	-	^{06 Asp tRNA}
1197827	1197902	-	76	33594723	BPPt11	-	^{04 Glu tRNA}
1197934	1198009	-	76	33594723	BPPt12	-	^{02 Ala tRNA}
1212419	1212495	-	77	33594723	BPPt13	-	^{06 Asp tRNA}
1212531	1212606	-	76	33594723	BPPt14	-	^{04 Glu tRNA}
1212638	1212713	-	76	33594723	BPPt15	-	^{02 Ala tRNA}
1293120	1293194	-	75	33594723	BPPt16	-	^{11 Arg tRNA}
1520256	1520331	-	76	33594723	BPPt17	-	^{02 Ala tRNA}
1840550	1842081	+	1532	33594723	BPPr01	-	16S ribosomal RNA
1842179	1842255	+	77	33594723	BPPt18	-	^{14 Ile tRNA}
1842276	1842351	+	76	33594723	BPPt19	-	^{02 Ala tRNA}
1842674	1845555	+	2882	33594723	BPPr02	-	23S ribosomal RNA
1845730	1845844	+	115	33594723	BPPr03	-	5S ribosomal RNA
1975143	1975218	-	76	33594723	BPPt20	-	^{12 Thr tRNA}
1975390	1975465	+	76	33594723	BPPt21	-	^{07 Asn tRNA}
1979616	1979691	-	76	33594723	BPPt22	-	^{16 Met tRNA}
2090948	2091024	+	77	33594723	BPPt23	-	^{13 Val tRNA}
2137768	2137854	+	87	33594723	BPPt24	-	^{15 Leu tRNA}
2225163	2225239	+	77	33594723	BPPt25	-	^{03 Pro tRNA}
2316095	2316171	+	77	33594723	BPPt26	-	^{11 Arg tRNA}
2396937	2397012	+	76	33594723	BPPt27	-	^{09 His tRNA}
2435920	2436012	+	93	33594723	BPPt28	-	^{08 Ser tRNA}
2450739	2450815	+	77	33594723	BPPt29	-	^{11 Arg tRNA}
2465930	2466006	+	77	33594723	BPPt30	-	^{11 Arg tRNA}
2581586	2583117	+	1532	33594723	BPPr04	-	16S ribosomal RNA
2583215	2583291	+	77	33594723	BPPt31	-	^{14 Ile tRNA}
2583312	2583387	+	76	33594723	BPPt32	-	^{02 Ala tRNA}
2583710	2586591	+	2882	33594723	BPPr05	-	23S ribosomal RNA
2586766	2586880	+	115	33594723	BPPr06	-	5S ribosomal RNA
2711665	2711741	-	77	33594723	BPPt33	-	^{16 Met tRNA}
2721225	2721309	-	85	33594723	BPPt34	-	^{15 Leu tRNA}
2722170	2722254	-	85	33594723	BPPt35	-	^{15 Leu tRNA}
2728633	2728708	+	76	33594723	BPPt36	-	^{13 Val tRNA}
2803874	2803950	+	77	33594723	BPPt37	-	^{03 Pro tRNA}
2811859	2811935	+	77	33594723	BPPt38	-	^{16 Met tRNA}
3038083	3038161	-	79	33594723	BPPt39	-	^{16 Met tRNA}
3379146	3379532	+	387	33594723	BPPs01	-	tmRNA
3699274	3699358	-	85	33594723	BPPt40	-	^{15 Leu tRNA}
3702329	3702413	+	85	33594723	BPPt41	-	^{15 Leu tRNA}
3719822	3719911	+	90	33594723	BPPt42	-	^{08 Ser tRNA}
3781521	3781596	+	76	33594723	BPPt43	-	^{01 Gly tRNA}
3819225	3819300	+	76	33594723	BPPt44	-	^{01 Gly tRNA}
3819361	3819434	+	74	33594723	BPPt45	-	^{19 Cys tRNA}
4003616	4003691	-	76	33594723	BPPt46	-	^{10 Lys tRNA}
4022808	4022883	-	76	33594723	BPPt47	-	^{10 Lys tRNA}
4067872	4068285	-	414	33594723	BPPs02	-
4074319	4074433	-	115	33594723	BPPr07	-	5S ribosomal RNA
4074608	4077489	-	2882	33594723	BPPr08	-	23S ribosomal RNA
4077812	4077887	-	76	33594723	BPPt48	-	^{02 Ala tRNA}
4077908	4077984	-	77	33594723	BPPt49	-	^{14 Ile tRNA}
4078082	4079613	-	1532	33594723	BPPr09	-	16S ribosomal RNA
4147598	4147672	-	75	33594723	BPPt50	-	^{13 Val tRNA}
4180156	4180246	-	91	33594723	BPPt51	-	^{08 Ser tRNA}
4443687	4443761	-	75	33594723	BPPt52	-	^{11 Arg tRNA}
4622238	4622313	+	76	33594723	BPPt53	-	^{12 Thr tRNA}
4648812	4648887	+	76	33594723	BPPt54	-	^{07 Asn tRNA}