Геном прокариот/Материалы:NC 002977

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_002977            3304561 bp    DNA     circular BCT 12-MAR-2007
   DEFINITION  Methylococcus capsulatus str. Bath, complete genome.
   ACCESSION   NC_002977
   VERSION     NC_002977.6  GI:77128441
   KEYWORDS    .
   SOURCE      Methylococcus capsulatus str. Bath
     ORGANISM  Methylococcus capsulatus str. Bath
               Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales;
               Methylococcaceae; Methylococcus.
   REFERENCE   1  (bases 1 to 3304561)
     AUTHORS   Ward,N., Larsen,O., Sakwa,J., Bruseth,L., Khouri,H., Durkin,A.S.,
               Dimitrov,G., Jiang,L., Scanlan,D., Kang,K.H., Lewis,M.,
               Nelson,K.E., Methe,B., Wu,M., Heidelberg,J.F., Paulsen,I.T.,
               Fouts,D., Ravel,J., Tettelin,H., Ren,Q., Read,T., DeBoy,R.T.,
               Seshadri,R., Salzberg,S.L., Jensen,H.B., Birkeland,N.K.,
               Nelson,W.C., Dodson,R.J., Grindhaug,S.H., Holt,I., Eidhammer,I.,
               Jonasen,I., Vanaken,S., Utterback,T., Feldblyum,T.V., Fraser,C.M.,
               Lillehaug,J.R. and Eisen,J.A.
     TITLE     Genomic insights into methanotrophy: the complete genome sequence
               of Methylococcus capsulatus (Bath)
     JOURNAL   PLoS Biol. 2 (10), E303 (2004)
      PUBMED   15383840
   REFERENCE   2  (bases 1 to 3304561)
     AUTHORS   Ward,N., Larsen,O., Eisen,J.A., Sakwa,J., Bruseth,L., Khouri,H.M.,
               Durkin,A.S., Dimitrov,G., Jiang,L., Scanlan,D., Kang,K.,
               Lewis,M.R., Nelson,K.E., Methe,B., Wu,M., Heidelberg,J.F.,
               Paulsen,I.T., Fouts,D., Ravel,J., Tettelin,H., Ren,Q., Read,T.D.,
               DeBoy,R.T., Seshadri,R., Salzberg,S.L., Jensen,H.B.,
               Birkeland,N.K., Nelson,W.C., Dodson,R.J., Grindhaug,S.H.,
               Holt,I.E., Eidhammer,I., Jonasen,I., Van Aken,S., Utterback,T.,
               Feldblyum,T.V., Lillehaug,J. and Fraser,C.M.
     TITLE     Direct Submission
     JOURNAL   Submitted (01-OCT-2004) The Institute for Genomic Research, 9712
               Medical Center Dr., Rockville, MD 20850, USA
   REFERENCE   3  (bases 1 to 3304561)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE017282.
               On Oct 5, 2005 this sequence version replaced gi:53802292.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
200374	200450	+	77	77128441	MCA_tRNA-Arg-1	-	^{11 Arg tRNA}
279347	279439	-	93	77128441	MCA_tRNA-Ser-1	-	^{08 Ser tRNA}
397706	397798	+	93	77128441	MCA_tRNA-Ser-2	-	^{08 Ser tRNA}
520023	520098	-	76	77128441	MCA_tRNA-Lys-1	-	^{10 Lys tRNA}
520111	520186	-	76	77128441	MCA_tRNA-His-1	-	^{09 His tRNA}
520196	520272	-	77	77128441	MCA_tRNA-Arg-2	-	^{11 Arg tRNA}
520279	520355	-	77	77128441	MCA_tRNA-Pro-1	-	^{03 Pro tRNA}
542169	542253	+	85	77128441	MCA_tRNA-Leu-1	-	^{15 Leu tRNA}
548717	548792	+	76	77128441	MCA_tRNA-Val-1	-	^{13 Val tRNA}
548809	548885	+	77	77128441	MCA_tRNA-Asp-1	-	^{06 Asp tRNA}
608463	608538	+	76	77128441	MCA_tRNA-Thr-1	-	^{12 Thr tRNA}
674701	674787	+	87	77128441	MCA_tRNA-Leu-2	-	^{15 Leu tRNA}
709014	709098	+	85	77128441	MCA_tRNA-Leu-3	-	^{15 Leu tRNA}
729050	729126	+	77	77128441	MCA_tRNA-Val-2	-	^{13 Val tRNA}
760778	760865	+	88	77128441	MCA_tRNA-Ser-3	-	^{08 Ser tRNA}
788147	789619	+	1473	77128441	MCA_Mc16SA	-	16S ribosomal RNA
789802	789878	+	77	77128441	MCA_tRNA-Ile-1	-	^{14 Ile tRNA}
789888	789963	+	76	77128441	MCA_tRNA-Ala-1	-	^{02 Ala tRNA}
790187	793090	+	2904	77128441	MCA_Mc23SA	-	23S ribosomal RNA
793178	793294	+	117	77128441	MCA_Mc5SA	-	5S ribosomal RNA
950482	950555	+	74	77128441	MCA_tRNA-Gln-1	-	^{05 Gln tRNA}
1107052	1107126	+	75	77128441	MCA_tRNA-Gln-2	-	^{05 Gln tRNA}
1109428	1109512	+	85	77128441	MCA_tRNA-Tyr-1	-	^{18 Tyr tRNA}
1109530	1109603	+	74	77128441	MCA_tRNA-Gly-1	-	^{01 Gly tRNA}
1109634	1109709	+	76	77128441	MCA_tRNA-Thr-2	-	^{12 Thr tRNA}
1111007	1111082	+	76	77128441	MCA_tRNA-Trp-1	-	^{20 Trp tRNA}
1147157	1147230	-	74	77128441	MCA_tRNA-Gly-2	-	^{01 Gly tRNA}
1300895	1300970	+	76	77128441	MCA_tRNA-Ala-2	-	^{02 Ala tRNA}
1300994	1301069	+	76	77128441	MCA_tRNA-Glu-1	-	^{04 Glu tRNA}
1426954	1427028	+	75	77128441	MCA_tRNA-Val-3	-	^{13 Val tRNA}
1492636	1492712	-	77	77128441	MCA_tRNA-Met-1	-	^{16 Met tRNA}
1752376	1752466	+	91	77128441	MCA_tRNA-Ser-4	-	^{08 Ser tRNA}
1787355	1787430	+	76	77128441	MCA_tRNA-Gly-3	-	^{01 Gly tRNA}
1787486	1787559	+	74	77128441	MCA_tRNA-Cys-1	-	^{19 Cys tRNA}
1825026	1825101	-	76	77128441	MCA_tRNA-Lys-2	-	^{10 Lys tRNA}
2128247	2128331	+	85	77128441	MCA_tRNA-Leu-4	-	^{15 Leu tRNA}
2225932	2226018	-	87	77128441	MCA_tRNA-Leu-5	-	^{15 Leu tRNA}
2305048	2305124	+	77	77128441	MCA_tRNA-Arg-3	-	^{11 Arg tRNA}
2305182	2305258	+	77	77128441	MCA_tRNA-Pro-2	-	^{03 Pro tRNA}
2358257	2358615	-	359	77128441	MCA_McrnpB1	-	sRNA
2504641	2504716	-	76	77128441	MCA_tRNA-Glu-2	-	^{04 Glu tRNA}
2557926	2558001	-	76	77128441	MCA_tRNA-Asn-1	-	^{07 Asn tRNA}
2558037	2558113	-	77	77128441	MCA_tRNA-Arg-4	-	^{11 Arg tRNA}
2682979	2683055	-	77	77128441	MCA_tRNA-Met-2	-	^{16 Met tRNA}
2818519	2818874	+	356	77128441	MCA_MctmRNA1	-	sRNA
2912259	2912375	-	117	77128441	MCA_Mc5SB	-	5S ribosomal RNA
2912463	2915366	-	2904	77128441	MCA_Mc23SB	-	23S ribosomal RNA
2915590	2915665	-	76	77128441	MCA_tRNA-Ala-3	-	^{02 Ala tRNA}
2915675	2915751	-	77	77128441	MCA_tRNA-Ile-2	-	^{14 Ile tRNA}
2915934	2917406	-	1473	77128441	MCA_Mc16SB	-	16S ribosomal RNA
3090444	3090519	+	76	77128441	MCA_tRNA-Thr-3	-	^{12 Thr tRNA}
3168604	3168680	+	77	77128441	MCA_tRNA-Met-3	-	^{16 Met tRNA}
3169116	3169192	-	77	77128441	MCA_tRNA-Pro-3	-	^{03 Pro tRNA}
3198706	3198781	-	76	77128441	MCA_tRNA-Phe-1	-	^{17 Phe tRNA}