Геном прокариот/Материалы:NC 003155

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   LOCUS       NC_003155            9025608 bp    DNA     linear   BCT 13-APR-2006
   DEFINITION  Streptomyces avermitilis MA-4680, complete genome.
   ACCESSION   NC_003155
   VERSION     NC_003155.3  GI:57833846
   KEYWORDS    .
   SOURCE      Streptomyces avermitilis MA-4680
     ORGANISM  Streptomyces avermitilis MA-4680
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Streptomycineae; Streptomycetaceae; Streptomyces.
   REFERENCE   1
     AUTHORS   Ikeda,H., Ishikawa,J., Hanamoto,A., Shinose,M., Kikuchi,H.,
               Shiba,T., Sakaki,Y., Hattori,M. and Omura,S.
     TITLE     Complete genome sequence and comparative analysis of the industrial
               microorganism Streptomyces avermitilis
     JOURNAL   Nat. Biotechnol. 21 (5), 526-531 (2003)
      PUBMED   12692562
   REFERENCE   2
     AUTHORS   Omura,S., Ikeda,H., Ishikawa,J., Hanamoto,A., Takahashi,C.,
               Shinose,M., Takahashi,Y., Horikawa,H., Nakazawa,H., Osonoe,T.,
               Kikuchi,H., Shiba,T., Sakaki,Y. and Hattori,M.
     TITLE     Genome sequence of an industrial microorganism Streptomyces
               avermitilis: deducing the ability of producing secondary
               metabolites
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 98 (21), 12215-12220 (2001)
      PUBMED   11572948
   REFERENCE   3  (bases 1 to 9025608)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 9025608)
     AUTHORS   Omura,S., Ikeda,H., Ishikawa,J., Hanamoto,A., Takahashi,C.,
               Shinose,M., Takahashi,Y., Horikawa,H., Nakazawa,H., Osonoe,T.,
               Kushida,N., Shiba,T., Sakaki,Y. and Hattori,M.
     TITLE     Direct Submission
     JOURNAL   Submitted (29-MAR-2002) Kitasato University, Kitasato Institute for
               Life Sciences, 1-15-1 Kitasato, Sagamihara, Kanagawa 228-8555,
               Japan
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from BA000030.
               On Jan 14, 2005 this sequence version replaced gi:29826540.


Расположение РНК править

Начало Конец Направление Длина PID Ген COG Комментарий
357776 357847 + 72 57833846 SAVt01 - Anticodon: CAC
1675869 1675942 + 74 57833846 SAVt02 - Anticodon: CAT
1965347 1965423 - 77 57833846 SAVt03 - Anticodon: GGG
1992012 1992088 - 77 57833846 SAVt04 - Anticodon: GGG
2222599 2222686 - 88 57833846 SAVt05 - Anticodon: GAG
3072632 3072707 - 76 57833846 SAVt06 - Anticodon: GGT
3073559 3073684 - 126 57833846 SAVr01 - 5S ribosomal RNA
3073772 3076895 - 3124 57833846 SAVr02 - 23S ribosomal RNA
3077206 3078735 - 1530 57833846 SAVr03 - 16S ribosomal RNA
3295252 3295324 - 73 57833846 SAVt07 - Anticodon: CTC
3295345 3295416 - 72 57833846 SAVt08 - Anticodon: CTG
3295438 3295510 - 73 57833846 SAVt09 - Anticodon: CTC
3295573 3295645 - 73 57833846 SAVt10 - Anticodon: CTC
3295688 3295759 - 72 57833846 SAVt11 - Anticodon: CTG
3655871 3655942 + 72 57833846 SAVt12 - Anticodon: CCG
3813093 3813166 - 74 57833846 SAVt13 - Anticodon: CAT
3815456 3815530 - 75 57833846 SAVt14 - Anticodon: CAT
4362610 4362695 - 86 57833846 SAVt15 - Anticodon: TAA
4410534 4410608 + 75 57833846 SAVt16 - Anticodon: TTG
4542466 4542542 - 77 57833846 SAVt17 - Anticodon: CGC
4589760 4589835 + 76 57833846 SAVt18 - Anticodon: CCT
4886830 4886906 - 77 57833846 SAVt19 - Anticodon: TGT
5024100 5024225 - 126 57833846 SAVr04 - 5S ribosomal RNA
5024313 5027435 - 3123 57833846 SAVr05 - 23S ribosomal RNA
5027746 5029275 - 1530 57833846 SAVr06 - 16S ribosomal RNA
5051970 5052043 - 74 57833846 SAVt20 - Anticodon: CAT
5055486 5055561 - 76 57833846 SAVt21 - Anticodon: TTT
5063087 5063159 + 73 57833846 SAVt22 - Anticodon: TTC
5063207 5063281 + 75 57833846 SAVt23 - Anticodon: GTC
5063306 5063382 + 77 57833846 SAVt24 - Anticodon: GAA
5068123 5068197 + 75 57833846 SAVt25 - Anticodon: GTC
5081791 5081866 + 76 57833846 SAVt26 - Anticodon: GCC
5085779 5085854 + 76 57833846 SAVt27 - Anticodon: GCC
5095065 5095146 - 82 57833846 SAVs01 - small cytoplasmic, RNA (4.5S RNA)
5095224 5095311 + 88 57833846 SAVt28 - Anticodon: GGA
5129698 5129782 + 85 57833846 SAVt29 - Anticodon: CGA
5154937 5155009 - 73 57833846 SAVt30 - Anticodon: ACG
5155215 5155305 - 91 57833846 SAVt31 - Anticodon: GCT
5177691 5177777 - 87 57833846 SAVt32 - Anticodon: TGA
5206939 5207028 - 90 57833846 SAVt33 - Anticodon: GCT
5299302 5299378 + 77 57833846 SAVt34 - Anticodon: GAT
5304905 5304977 + 73 57833846 SAVt35 - Anticodon: TGC
5322106 5322192 + 87 57833846 SAVt36 - Anticodon: CAG
5452769 5452842 - 74 57833846 SAVt37 - Anticodon: CCC
5594481 5594554 - 74 57833846 SAVt38 - Anticodon: CGG
5650316 5650389 + 74 57833846 SAVt39 - Anticodon: CGT
5759344 5760873 + 1530 57833846 SAVr07 - 16S ribosomal RNA
5761184 5764306 + 3123 57833846 SAVr08 - 23S ribosomal RNA
5764394 5764519 + 126 57833846 SAVr09 - 5S ribosomal RNA
5950170 5950251 + 82 57833846 SAVt40 - Anticodon: GTA
5956602 5956674 + 73 57833846 SAVt41 - Anticodon: GGT
5956721 5956793 + 73 57833846 SAVt42 - Anticodon: CAT
5964532 5964607 + 76 57833846 SAVt43 - Anticodon: CCA
6124388 6125917 + 1530 57833846 SAVr10 - 16S ribosomal RNA
6126228 6129350 + 3123 57833846 SAVr11 - 23S ribosomal RNA
6129438 6129563 + 126 57833846 SAVr12 - 5S ribosomal RNA
6202758 6203146 + 389 57833846 SAVs02 - stable RNA
6242261 6242335 - 75 57833846 SAVt44 - Anticodon: GCA
6279029 6279112 - 84 57833846 SAVt45 - Anticodon: TAG
6329202 6329278 - 77 57833846 SAVt46 - Anticodon: CTT
6335068 6335141 - 74 57833846 SAVt47 - Anticodon: CTT
6349312 6349385 - 74 57833846 SAVt48 - Anticodon: CTT
6372705 6372777 - 73 57833846 SAVt49 - Anticodon: GTG
6501509 6501584 - 76 57833846 SAVt50 - Anticodon: TCT
6604435 6604508 - 74 57833846 SAVt51 - Anticodon: TCC
6604662 6604738 + 77 57833846 SAVt52 - Anticodon: TGG
6653846 6653918 + 73 57833846 SAVt53 - Anticodon: GGC
6658303 6658375 + 73 57833846 SAVt54 - Anticodon: GGC
6875603 6875675 + 73 57833846 SAVt55 - Anticodon: GTT
6875681 6875753 + 73 57833846 SAVt56 - Anticodon: GTT
6875920 6875996 + 77 57833846 SAVt57 - Anticodon: CAT
7021984 7022058 + 75 57833846 SAVt58 - Anticodon: TAC
7471270 7471342 - 73 57833846 SAVt59 - Anticodon: CAA
7765515 7767044 + 1530 57833846 SAVr13 - 16S ribosomal RNA
7767351 7770474 + 3124 57833846 SAVr14 - 23S ribosomal RNA
7770611 7770736 + 126 57833846 SAVr15 - 5S ribosomal RNA
7937463 7937550 - 88 57833846 SAVt60 - Anticodon: GAG
8122352 8122426 - 75 57833846 SAVt61 - Anticodon: GAC
8122467 8122538 - 72 57833846 SAVt62 - Anticodon: GAC
8122558 8122629 - 72 57833846 SAVt63 - Anticodon: GAC
8122631 8122704 - 74 57833846 SAVt64 - Anticodon: GCA
8122743 8122815 - 73 57833846 SAVt65 - Anticodon: GCC
8129564 8129635 + 72 57833846 SAVt66 - Anticodon: CAC
8139938 8140012 + 75 57833846 SAVt67 - Anticodon: CAC
8328598 8330127 + 1530 57833846 SAVr16 - 16S ribosomal RNA
8330438 8333560 + 3123 57833846 SAVr17 - 23S ribosomal RNA
8333648 8333773 + 126 57833846 SAVr18 - 5S ribosomal RNA
8576989 8577062 + 74 57833846 SAVt68 - Anticodon: GGG