Материалы:NC 003197

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   LOCUS       NC_003197            4857432 bp    DNA     circular BCT 13-APR-2007
   DEFINITION  Salmonella typhimurium LT2, complete genome.
   ACCESSION   NC_003197
   VERSION     NC_003197.1  GI:16763390
   KEYWORDS    .
   SOURCE      Salmonella typhimurium LT2
     ORGANISM  Salmonella typhimurium LT2
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Salmonella.
   REFERENCE   1  (bases 1 to 4857432)
     AUTHORS   McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W.,
               Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F.,
               Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A.,
               Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W.,
               Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K.
     TITLE     Complete genome sequence of Salmonella enterica serovar Typhimurium
               LT2
     JOURNAL   Nature 413 (6858), 852-856 (2001)
      PUBMED   11677609
   REFERENCE   2  (bases 1 to 4857432)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4857432)
     CONSRTM   NCBI Microbial Genomes Annotation Project
     TITLE     Direct Submission
     JOURNAL   Submitted (06-NOV-2001) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE006468.
               COMPLETENESS: full length.
               REFSEQ gene predictions performed by GeneMark 2.4/GeneMark.hmm 2.0
               with comparison to original submitter provided annotation; tRNA
               sequences predicted using tRNAscan-SE 1.21.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
289189	290732	+	1544	16763390	STM0249	-	16S ribosomal RNA
290800	290873	+	74	16763390	STM0250	-	^{14 Ile tRNA}
290976	291051	+	76	16763390	STM0251	-	^{02 Ala tRNA}
291244	294336	+	3093	16763390	STM0252	-	23S ribosomal RNA
294519	294640	+	122	16763390	STM0253	-	5S ribosomal RNA
294838	294911	+	74	16763390	STM0254	-	^{13 Val tRNA}
304277	304350	+	74	16763390	STM0265	-	Sec tRNA
368806	368878	+	73	16763390	STM0323	-	^{12 Thr tRNA}
524424	524539	+	116	16763390	STM0467	-	4.5S ribosomal RNA
613567	613640	+	74	16763390	STM0553	-	^{11 Arg tRNA}
617984	618056	+	73	16763390	STM05559.T1	-
738011	738082	-	72	16763390	STM0673	-	^{05 Gln tRNA}
738129	738200	-	72	16763390	STM0674	-	^{05 Gln tRNA}
738250	738323	-	74	16763390	STM0675	-	^{16 Met tRNA}
738342	738413	-	72	16763390	STM0676	-	^{05 Gln tRNA}
738452	738523	-	72	16763390	STM0677	-	^{05 Gln tRNA}
738550	738631	-	82	16763390	STM0678	-	^{15 Leu tRNA}
738643	738716	-	74	16763390	STM0679	-	^{16 Met tRNA}
818775	818847	+	73	16763390	STM0751	-	^{10 Lys tRNA}
818982	819054	+	73	16763390	STM0752	-	^{13 Val tRNA}
819061	819133	+	73	16763390	STM0753	-	^{10 Lys tRNA}
819186	819258	+	73	16763390	STM0754	-	^{10 Lys tRNA}
819396	819468	+	73	16763390	STM0755	-	^{10 Lys tRNA}
1027441	1027525	-	85	16763390	STM0949	-	^{08 Ser tRNA}
1175321	1175405	+	85	16763390	STM1086	-	^{08 Ser tRNA}
1224743	1224827	-	85	16763390	STM1134	-	^{08 Ser tRNA}
1333209	1333282	+	74	16763390	STM1247	-	Xaa tRNA
1345647	1345720	+	74	16763390	STM1262	-	Xaa tRNA
1444831	1444937	-	107	16763390	STM1363	-	regulatory RNA
1501640	1501713	-	74	16763390	STM1423	-	^{13 Val tRNA}
1501727	1501800	-	74	16763390	STM1424	-	^{13 Val tRNA}
1852570	1852651	+	82	16763390	STM1757	-	^{18 Tyr tRNA}
1852683	1852825	+	143	16763390	STM1758	-	regulatory RNA
1852859	1852940	+	82	16763390	STM1759	-	^{18 Tyr tRNA}
2035366	2035449	-	84	16763390	STM1942	-	^{15 Leu tRNA}
2035464	2035534	-	71	16763390	STM1943	-	^{19 Cys tRNA}
2035590	2035662	-	73	16763390	STM1944	-	^{01 Gly tRNA}
2068650	2068733	-	84	16763390	STM1985	-	small regulatory RNA DsrA
2082177	2082263	-	87	16763390	STM2000	-	^{08 Ser tRNA}
2083250	2083322	+	73	16763390	STM2002	-	^{07 Asn tRNA}
2084220	2084292	+	73	16763390	STM2004	-	^{07 Asn tRNA}
2094165	2094237	-	73	16763390	STM2012	-	^{07 Asn tRNA}
2095995	2096067	+	73	16763390	STM2014	-	^{07 Asn tRNA}
2330749	2330822	+	74	16763390	STM2229	-	^{03 Pro tRNA}
2366830	2367005	-	176	16763390	STM2268	-	regulatory RNA
2505822	2505893	+	72	16763390	STM2394	-	^{11 Arg tRNA}
2528939	2529011	-	73	16763390	STM2411	-	^{02 Ala tRNA}
2529057	2529129	-	73	16763390	STM2412	-	^{02 Ala tRNA}
2531835	2531907	+	73	16763390	STM2416	-	^{13 Val tRNA}
2531956	2532028	+	73	16763390	STM2417	-	^{13 Val tRNA}
2532073	2532145	+	73	16763390	STM2418	-	^{13 Val tRNA}
2532153	2532225	+	73	16763390	STM2419	-	^{10 Lys tRNA}
2761647	2761720	-	74	16763390	STM2615	-	Xaa tRNA
2796440	2796561	-	122	16763390	STM2656	-	5S ribosomal RNA
2796755	2799764	-	3010	16763390	STM2657	-	23S ribosomal RNA
2799958	2800030	-	73	16763390	STM2658	-	Sec tRNA
2800118	2801660	-	1543	16763390	STM2659	-	16S ribosomal RNA
2844218	2844312	+	95	16763390	STM2693	-	regulatory RNA
2969928	2970001	-	74	16763390	STM2821	-	^{11 Arg tRNA}
2970198	2970271	-	74	16763390	STM2822	-	^{11 Arg tRNA}
2970337	2970410	-	74	16763390	STM2823	-	^{11 Arg tRNA}
2970476	2970549	-	74	16763390	STM2824	-	^{11 Arg tRNA}
2970556	2970645	-	90	16763390	STM2825	-	^{08 Ser tRNA}
3116696	3117050	-	355	16763390	STM2966	-	regulatory RNA
3141064	3141137	+	74	16763390	STM2989	-	^{16 Met tRNA}
3141170	3141243	+	74	16763390	STM2990	-	^{16 Met tRNA}
3197425	3197495	-	71	16763390	STM3037	-	^{01 Gly tRNA}
3276146	3276218	+	73	16763390	STM3116	-	^{17 Phe tRNA}
3379004	3379076	+	73	16763390	STM3213	-	^{16 Met tRNA Неверная идентификация}
3414803	3415179	+	377	16763390	STM3246	-	regulatory RNA
3458506	3458579	-	74	16763390	STM3289	-	^{16 Met tRNA}
3461755	3461838	-	84	16763390	STM3292	-	^{15 Leu tRNA}
3566622	3566743	-	122	16763390	STM3393	-	5S ribosomal RNA
3566784	3566856	-	73	16763390	STM3394	-	^{12 Thr tRNA}
3566867	3566988	-	122	16763390	STM3395	-	5S ribosomal RNA
3567078	3570071	-	2994	16763390	STM3396	-	23S ribosomal RNA
3570307	3570379	-	73	16763390	STM3397	-	^{05 Gln tRNA}
3570463	3572006	-	1544	16763390	STM3398	-	16S ribosomal RNA
3820412	3820485	-	74	16763390	STM3634	-	^{03 Pro tRNA}
3948576	3948666	+	91	16763390	STM3751	-	Sec tRNA
4100132	4101675	+	1544	16763390	STM3889	-	16S ribosomal RNA
4101759	4101831	+	73	16763390	STM3890	-	^{20 Trp tRNA}
4102028	4105021	+	2994	16763390	STM3891	-	23S ribosomal RNA
4105028	4105126	+	99	16763390	STM3893	-	regulatory RNA
4105111	4105230	+	120	16763390	STM3894	-	5S ribosomal RNA
4105283	4105362	+	80	16763390	STM3895	-	Sec tRNA
4105368	4105440	+	73	16763390	STM3896	-	Xaa tRNA
4140908	4140981	+	74	16763390	STM3931	-	^{11 Arg tRNA}
4141039	4141111	+	73	16763390	STM3932	-	^{09 His tRNA}
4141135	4141218	+	84	16763390	STM3933	-	^{15 Leu tRNA}
4141264	4141337	+	74	16763390	STM3934	-	^{03 Pro tRNA}
4196059	4197600	+	1542	16763390	STM3988	-	16S ribosomal RNA
4197670	4197743	+	74	16763390	STM3989	-	^{14 Ile tRNA}
4197858	4197930	+	73	16763390	STM3990	-	^{02 Ala tRNA}
4198116	4201110	+	2995	16763390	STM3991	-	23S ribosomal RNA
4201302	4201423	+	122	16763390	STM3992	-	5S ribosomal RNA
4209066	4209131	+	66	16763390	STM4000	-	spot 42 RNA
4351130	4352673	+	1544	16763390	STM4132	-	16S ribosomal RNA
4352741	4352814	+	74	16763390	STM4133	-	^{13 Val tRNA}
4352929	4353001	+	73	16763390	STM4134	-	^{02 Ala tRNA}
4353187	4356180	+	2994	16763390	STM4135	-	23S ribosomal RNA
4356373	4356493	+	121	16763390	STM4136	-	5S ribosomal RNA
4360046	4360118	+	73	16763390	STM4142	-	^{12 Thr tRNA}
4360130	4360211	+	82	16763390	STM4143	-	^{18 Tyr tRNA}
4360331	4360402	+	72	16763390	STM4144	-	^{01 Gly tRNA}
4360412	4360484	+	73	16763390	STM4145	-	^{12 Thr tRNA}
4394675	4396219	+	1545	16763390	STM4177	-	16S ribosomal RNA
4396303	4396375	+	73	16763390	STM4178	-	Sec tRNA
4396611	4399604	+	2994	16763390	STM4179	-	23S ribosomal RNA
4399797	4399918	+	122	16763390	STM4180	-	5S ribosomal RNA
4566577	4566649	-	73	16763390	STM4321	-	^{17 Phe tRNA}
4596412	4596484	+	73	16763390	STM4352	-	^{01 Gly tRNA}
4596644	4596716	+	73	16763390	STM4353	-	^{01 Gly tRNA}
4596876	4596948	+	73	16763390	STM4354	-	^{01 Gly tRNA}
4730996	4731077	+	82	16763390	STM4487	-	^{15 Leu tRNA}
4810613	4810696	-	84	16763390	STM4553	-	^{15 Leu tRNA}
4810731	4810814	-	84	16763390	STM4554	-	^{15 Leu tRNA}
4810845	4810928	-	84	16763390	STM4555	-	^{15 Leu tRNA}