Геном прокариот/Материалы:NC 003228

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_003228            5205140 bp    DNA     circular BCT 03-DEC-2005
   DEFINITION  Bacteroides fragilis NCTC 9343, complete genome.
   ACCESSION   NC_003228
   VERSION     NC_003228.3  GI:60679597
   KEYWORDS    complete genome.
   SOURCE      Bacteroides fragilis NCTC 9343
     ORGANISM  Bacteroides fragilis NCTC 9343
               Bacteria; Bacteroidetes; Bacteroidetes (class); Bacteroidales;
               Bacteroidaceae; Bacteroides.
   REFERENCE   1  (bases 1 to 5205140)
     AUTHORS   Cerdeno-Tarraga,A.M., Patrick,S., Crossman,L.C., Blakely,G.,
               Abratt,V., Lennard,N., Poxton,I., Duerden,B., Harris,B.,
               Quail,M.A., Barron,A., Clark,L., Corton,C., Doggett,J.,
               Holden,M.T., Larke,N., Line,A., Lord,A., Norbertczak,H., Ormond,D.,
               Price,C., Rabbinowitsch,E., Woodward,J., Barrell,B. and Parkhill,J.
     TITLE     Extensive DNA inversions in the B. fragilis genome control variable
               gene expression
     JOURNAL   Science 307 (5714), 1463-1465 (2005)
      PUBMED   15746427
   REFERENCE   2  (bases 1 to 5205140)
     AUTHORS   Cerdeno-Tarraga,A.M.
     TITLE     Direct Submission
     JOURNAL   Submitted (29-JUL-2004) Pathogen Sequencing Unit, Sanger Institute,
               Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, United
               Kingdom
   REFERENCE   3  (bases 1 to 5205140)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CR626927.
               On Mar 10, 2005 this sequence version replaced gi:27532922.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
79576	79646	+	71	60679597	BFt01	-	^{05 Gln tRNA}
276306	276380	-	75	60679597	BFt02	-	^{04 Glu tRNA}
419981	420065	-	85	60679597	BFt03	-	^{15 Leu tRNA}
537974	538046	+	73	60679597	BFt04	-	^{01 Gly tRNA}
538061	538144	+	84	60679597	BFt05	-	^{15 Leu tRNA}
561887	561959	-	73	60679597	BFt06	-	^{03 Pro tRNA}
561972	562044	-	73	60679597	BFt07	-	^{17 Phe tRNA}
643369	643445	-	77	60679597	BFt08	-	^{16 Met tRNA}
698177	698249	-	73	60679597	BFt09	-	^{10 Lys tRNA}
815932	816009	-	78	60679597	BFt10	-	^{03 Pro tRNA}
860622	860695	+	74	60679597	BFt11	-	^{05 Gln tRNA}
1096605	1096680	-	76	60679597	BFt12	-	^{01 Gly tRNA}
1096686	1096771	-	86	60679597	BFt13	-	^{18 Tyr tRNA}
1412164	1412240	+	77	60679597	BFt14	-	^{12 Thr tRNA}
1482663	1482747	+	85	60679597	BFt15	-	^{08 Ser tRNA}
1588839	1588923	+	85	60679597	BFt16	-	^{08 Ser tRNA}
1623835	1623906	+	72	60679597	BFt17	-	^{19 Cys tRNA}
1645741	1645817	-	77	60679597	BFt18	-	^{12 Thr tRNA}
1987251	1987323	-	73	60679597	BFt19	-	^{12 Thr tRNA}
2194242	2194328	+	87	60679597	BFt20	-	^{08 Ser tRNA}
2194407	2194481	+	75	60679597	BFt21	-	^{04 Glu tRNA}
2385065	2385137	-	73	60679597	BFt22	-	^{10 Lys tRNA}
2466259	2466335	+	77	60679597	BFt23	-	^{06 Asp tRNA}
2677212	2677288	+	77	60679597	BFt24	-	^{11 Arg tRNA}
2722442	2722554	+	113	60679597	BFr01	-
2774863	2774938	-	76	60679597	BFt25	-	^{10 Lys tRNA}
2778225	2778300	-	76	60679597	BFt26	-	^{10 Lys tRNA}
2837475	2837552	-	78	60679597	BFt27	-	^{03 Pro tRNA}
2837587	2837664	-	78	60679597	BFt28	-	^{03 Pro tRNA}
2891405	2891481	-	77	60679597	BFt29	-	^{11 Arg tRNA}
2891504	2891577	-	74	60679597	BFt30	-	^{11 Arg tRNA}
2891596	2891669	-	74	60679597	BFt31	-	^{11 Arg tRNA}
2932390	2932465	-	76	60679597	BFt32	-	^{01 Gly tRNA}
2977816	2977888	-	73	60679597	BFt33	-	^{01 Gly tRNA}
2977893	2977977	-	85	60679597	BFt34	-	^{15 Leu tRNA}
2978039	2978114	-	76	60679597	BFt35	-	^{01 Gly tRNA}
2978137	2978220	-	84	60679597	BFt36	-	^{15 Leu tRNA}
2978255	2978339	-	85	60679597	BFt37	-	^{15 Leu tRNA}
2978365	2978437	-	73	60679597	BFt38	-	^{01 Gly tRNA}
3201914	3202064	-	151	60679597	BFr02	-
3202227	3205053	-	2827	60679597	BFr03	-
3205200	3205273	-	74	60679597	BFt39	-	^{02 Ala tRNA}
3205302	3205378	-	77	60679597	BFt40	-	^{14 Ile tRNA}
3205531	3207063	-	1533	60679597	BFr04	-
3354845	3354918	+	74	60679597	BFt41	-	^{06 Asp tRNA}
3354949	3355025	+	77	60679597	BFt42	-	^{06 Asp tRNA}
3562730	3562805	+	76	60679597	BFt43	-	^{09 His tRNA}
3621322	3621395	+	74	60679597	BFt44	-	^{02 Ala tRNA}
3851053	3851203	-	151	60679597	BFr05	-
3851366	3854192	-	2827	60679597	BFr06	-
3854339	3854412	-	74	60679597	BFt45	-	^{02 Ala tRNA}
3854441	3854517	-	77	60679597	BFt46	-	^{14 Ile tRNA}
3854670	3856202	-	1533	60679597	BFr07	-
3863283	3863355	+	73	60679597	BFt47	-	^{17 Phe tRNA}
3999770	3999842	+	73	60679597	BFt48	-	^{20 Trp tRNA}
4155363	4155450	-	88	60679597	BFt49	-	^{08 Ser tRNA}
4256296	4256370	-	75	60679597	BFt50	-	^{11 Arg tRNA}
4410250	4410400	-	151	60679597	BFr08	-
4410563	4413388	-	2826	60679597	BFr09	-
4413535	4413608	-	74	60679597	BFt51	-	^{02 Ala tRNA}
4413637	4413713	-	77	60679597	BFt52	-	^{14 Ile tRNA}
4413866	4415398	-	1533	60679597	BFr10	-
4476507	4476581	-	75	60679597	BFt53	-	^{13 Val tRNA}
4476633	4476707	-	75	60679597	BFt54	-	^{13 Val tRNA}
4476734	4476811	-	78	60679597	BFt55	-	^{13 Val tRNA}
4596726	4596876	-	151	60679597	BFr11	-
4597039	4599864	-	2826	60679597	BFr12	-
4600011	4600084	-	74	60679597	BFt56	-	^{02 Ala tRNA}
4600113	4600189	-	77	60679597	BFt57	-	^{14 Ile tRNA}
4600342	4601874	-	1533	60679597	BFr13	-
4639785	4639860	+	76	60679597	BFt58	-	^{16 Met tRNA}
4654651	4654801	-	151	60679597	BFr14	-
4654964	4657789	-	2826	60679597	BFr15	-
4657936	4658009	-	74	60679597	BFt59	-	^{02 Ala tRNA}
4658038	4658114	-	77	60679597	BFt60	-	^{14 Ile tRNA}
4658273	4659805	-	1533	60679597	BFr16	-
4725373	4725448	-	76	60679597	BFt61	-	^{20 Trp tRNA}
4726737	4726808	-	72	60679597	BFt62	-	^{12 Thr tRNA}
4726819	4726891	-	73	60679597	BFt63	-	^{01 Gly tRNA}
4726920	4727005	-	86	60679597	BFt64	-	^{18 Tyr tRNA}
4727077	4727153	-	77	60679597	BFt65	-	^{12 Thr tRNA}
4742264	4742354	+	91	60679597	BFt66	-
4852871	4852954	-	84	60679597	BFt67	-	^{15 Leu tRNA}
4923439	4923512	+	74	60679597	BFt68	-	^{07 Asn tRNA}
4923542	4923618	+	77	60679597	BFt69	-	^{07 Asn tRNA}
5013908	5013982	-	75	60679597	BFt70	-	^{11 Arg tRNA}
5117302	5117375	+	74	60679597	BFt71	-	^{16 Met tRNA}
5124805	5124955	-	151	60679597	BFr17	-
5125118	5127943	-	2826	60679597	BFr18	-
5128090	5128163	-	74	60679597	BFt72	-	^{02 Ala tRNA}
5128192	5128268	-	77	60679597	BFt73	-	^{14 Ile tRNA}
5128421	5129953	-	1533	60679597	BFr19	-