Геном прокариот/Материалы:NC 003361

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_003361            1173390 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Chlamydophila caviae GPIC, complete genome.
   ACCESSION   NC_003361
   VERSION     NC_003361.3  GI:29839769
   KEYWORDS    .
   SOURCE      Chlamydophila caviae GPIC
     ORGANISM  Chlamydophila caviae GPIC
               Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila.
   REFERENCE   1  (bases 1 to 1173390)
     AUTHORS   Read,T.D., Myers,G.S., Brunham,R.C., Nelson,W.C., Paulsen,I.T.,
               Heidelberg,J., Holtzapple,E., Khouri,H., Federova,N.B., Carty,H.A.,
               Umayam,L.A., Haft,D.H., Peterson,J., Beanan,M.J., White,O.,
               Salzberg,S.L., Hsia,R.C., McClarty,G., Rank,R.G., Bavoil,P.M. and
               Fraser,C.M.
     TITLE     Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC):
               examining the role of niche-specific genes in the evolution of the
               Chlamydiaceae
     JOURNAL   Nucleic Acids Res. 31 (8), 2134-2147 (2003)
      PUBMED   12682364
   REFERENCE   2  (bases 1 to 1173390)
     AUTHORS   Read,T., Myers,G., Brunham,R., Nelson,W., Paulsen,I.,
               Heidelberg,J., Holtzapple,E., Khouri,H., Fedorova,N., Carty,H.,
               Umayam,L., Haft,D., Peterson,J., Beanan,M., White,O., Salzberg,S.,
               Hsia,R.-C., McClarty,G., Rank,R., Bavoil,P. and Fraser,C.
     TITLE     Direct Submission
     JOURNAL   Submitted (29-OCT-2002) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   REFERENCE   3  (bases 1 to 1173390)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-APR-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE015925.
               On Apr 15, 2003 this sequence version replaced gi:26106303.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
5212	5284	-	73	29839769	CCA_t01	-	^{02 Ala tRNA}
31667	31739	+	73	29839769	CCA_t02	-	^{11 Arg tRNA}
52238	52310	+	73	29839769	CCA_t03	-	^{12 Thr tRNA}
54398	54470	-	73	29839769	CCA_t04	-	^{10 Lys tRNA}
54497	54571	-	75	29839769	CCA_t05	-	^{04 Glu tRNA}
57735	57805	-	71	29839769	CCA_t06	-	^{01 Gly tRNA}
98333	98416	-	84	29839769	CCA_t07	-	^{15 Leu tRNA}
122375	122457	+	83	29839769	CCA_t08	-	^{15 Leu tRNA}
130116	130203	+	88	29839769	CCA_t09	-	^{08 Ser tRNA}
159272	159353	+	82	29839769	CCA_t10	-	^{15 Leu tRNA}
162068	162141	-	74	29839769	CCA_t11	-	^{11 Arg tRNA}
168077	168159	-	83	29839769	CCA_t12	-	^{15 Leu tRNA}
209996	210068	+	73	29839769	CCA_t13	-	^{17 Phe tRNA}
214462	214548	+	87	29839769	CCA_t14	-	^{08 Ser tRNA}
349998	350084	-	87	29839769	CCA_t15	-	^{08 Ser tRNA}
428232	428305	-	74	29839769	CCA_t16	-	^{11 Arg tRNA}
482104	482178	-	75	29839769	CCA_t17	-	^{03 Pro tRNA}
590122	590195	-	74	29839769	CCA_t18	-	^{06 Asp tRNA}
590199	590271	-	73	29839769	CCA_t19	-	^{13 Val tRNA}
594018	594090	+	73	29839769	CCA_t20	-	^{12 Thr tRNA}
594097	594179	+	83	29839769	CCA_t21	-	^{18 Tyr tRNA}
673902	673975	-	74	29839769	CCA_t22	-	^{14 Ile tRNA}
673981	674053	-	73	29839769	CCA_t23	-	^{02 Ala tRNA}
694648	694721	-	74	29839769	CCA_t24	-	^{16 Met tRNA}
694742	694814	-	73	29839769	CCA_t25	-	^{16 Met tRNA}
738275	738346	+	72	29839769	CCA_t26	-	^{07 Asn tRNA}
806326	806398	-	73	29839769	CCA_t27	-	^{20 Trp tRNA}
807679	807750	-	72	29839769	CCA_t28	-	^{12 Thr tRNA}
809848	809920	+	73	29839769	CCA_t29	-	^{16 Met tRNA}
844984	845065	-	82	29839769	CCA_t30	-	^{15 Leu tRNA}
879100	879184	-	85	29839769	CCA_t31	-	^{08 Ser tRNA}
883805	883878	+	74	29839769	CCA_t32	-	^{13 Val tRNA}
943399	943470	-	72	29839769	CCA_t33	-	^{05 Gln tRNA}
992926	992996	+	71	29839769	CCA_t34	-	^{19 Cys tRNA}
1020573	1020691	-	119	29839769	CCA_r01	-	5S ribosomal RNA
1020804	1023753	-	2950	29839769	CCA_r02	-	23S ribosomal RNA
1023977	1025525	-	1549	29839769	CCA_r03	-	16S ribosomal RNA
1026352	1026425	+	74	29839769	CCA_t35	-	^{09 His tRNA}
1064489	1064560	+	72	29839769	CCA_t36	-	^{01 Gly tRNA}
1138040	1138112	-	73	29839769	CCA_t37	-	^{11 Arg tRNA}
1171136	1171209	-	74	29839769	CCA_t38	-	^{03 Pro tRNA}