Геном прокариот/Материалы:NC 003366

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_003366            3031430 bp    DNA     circular BCT 20-JUN-2007
   DEFINITION  Clostridium perfringens str. 13, complete genome.
   ACCESSION   NC_003366
   VERSION     NC_003366.1  GI:18308982
   KEYWORDS    .
   SOURCE      Clostridium perfringens str. 13
     ORGANISM  Clostridium perfringens str. 13
               Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
               Clostridium.
   REFERENCE   1  (bases 1 to 3031430)
     AUTHORS   Shimizu,T., Ohtani,K., Hirakawa,H., Ohshima,K., Yamashita,A.,
               Shiba,T., Ogasawara,N., Hattori,M., Kuhara,S. and Hayashi,H.
     TITLE     Complete genome sequence of Clostridium perfringens, an anaerobic
               flesh-eater
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (2), 996-1001 (2002)
      PUBMED   11792842
   REFERENCE   2  (bases 1 to 3031430)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (24-JAN-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3031430)
     AUTHORS   Hattori,M., Yamashita,A., Oshima,K. and Shiba,T.
     TITLE     Direct Submission
     JOURNAL   Submitted (15-FEB-2001) Masahira Hattori, Kitasato Institute for
               Life Sciences, Kitasato University; Kitasato 1-15-1, Sagamihara,
               Kanagawa 228-8555, Japan
               (E-mail:hattori@genome.ls.kitasato-u.ac.jp,
               URL:http://genome.ls.kitasato-u.ac.jp, Tel:81-42-778-8194,
               Fax:81-42-778-8193)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from BA000016.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
10173	11680	+	1508	18308982	CPEr001	-	16S ribosomal RNA
11869	14773	+	2905	18308982	CPEr002	-	23S ribosomal RNA
14868	14982	+	115	18308982	CPEr003	-	5S ribosomal RNA
14992	15065	+	74	18308982	CPEt001	-	^{16 Met tRNA}
15074	15146	+	73	18308982	CPEt002	-	^{02 Ala tRNA}
23283	23370	+	88	18308982	CPEt003	-	^{08 Ser tRNA}
23407	23494	+	88	18308982	CPEt004	-	^{08 Ser tRNA}
24132	24219	+	88	18308982	CPEt005	-	^{08 Ser tRNA}
24228	24315	+	88	18308982	CPEt006	-	^{08 Ser tRNA}
39798	39871	+	74	18308982	CPEt007	-	^{11 Arg tRNA}
42972	43043	+	72	18308982	CPEt008	-	^{11 Arg tRNA}
54437	54523	+	87	18308982	CPEt009	-	^{08 Ser tRNA}
72786	74291	+	1506	18308982	CPEr004	-	16S ribosomal RNA
74480	77384	+	2905	18308982	CPEr005	-	23S ribosomal RNA
77479	77593	+	115	18308982	CPEr006	-	5S ribosomal RNA
77603	77676	+	74	18308982	CPEt010	-	^{16 Met tRNA}
77685	77757	+	73	18308982	CPEt011	-	^{02 Ala tRNA}
96258	97763	+	1506	18308982	CPEr007	-	16S ribosomal RNA
97952	100856	+	2905	18308982	CPEr008	-	23S ribosomal RNA
100909	101022	+	114	18308982	CPEr009	-	5S ribosomal RNA
101032	101104	+	73	18308982	CPEt012	-	^{10 Lys tRNA}
106097	107602	+	1506	18308982	CPEr010	-	16S ribosomal RNA
107791	110675	+	2885	18308982	CPEr011	-	23S ribosomal RNA
110728	110841	+	114	18308982	CPEr012	-	5S ribosomal RNA
110855	110926	+	72	18308982	CPEt013	-	^{07 Asn tRNA}
261964	263470	+	1507	18308982	CPEr013	-	16S ribosomal RNA
263659	266562	+	2904	18308982	CPEr014	-	23S ribosomal RNA
266680	266793	+	114	18308982	CPEr015	-	5S ribosomal RNA
266809	266881	+	73	18308982	CPEt014	-	^{17 Phe tRNA}
311356	311428	-	73	18308982	CPEt015	-	^{16 Met tRNA}
339055	340561	+	1507	18308982	CPEr016	-	16S ribosomal RNA
340725	340797	+	73	18308982	CPEt016	-	^{02 Ala tRNA}
340806	340879	+	74	18308982	CPEt017	-	^{14 Ile tRNA}
340982	343885	+	2904	18308982	CPEr017	-	23S ribosomal RNA
344003	344116	+	114	18308982	CPEr018	-	5S ribosomal RNA
344132	344204	+	73	18308982	CPEt018	-	^{17 Phe tRNA}
356964	357036	-	73	18308982	CPEt019	-	^{03 Pro tRNA}
637202	637274	+	73	18308982	CPEt020	-	^{16 Met tRNA}
735779	737284	+	1506	18308982	CPEr019	-	16S ribosomal RNA
737473	740379	+	2907	18308982	CPEr020	-	23S ribosomal RNA
740497	740610	+	114	18308982	CPEr021	-	5S ribosomal RNA
740621	740692	+	72	18308982	CPEt021	-	^{04 Glu tRNA}
857028	857113	-	86	18308982	CPEt022	-	^{15 Leu tRNA}
1036499	1036587	+	89	18308982	CPEt023	-	^{08 Ser tRNA}
1631987	1632070	-	84	18308982	CPEt024	-	^{15 Leu tRNA}
2136677	2136767	+	91	18308982	CPEt025	-	Sec tRNA
2180686	2180757	-	72	18308982	CPEt026	-	^{19 Cys tRNA}
2180766	2180836	-	71	18308982	CPEt027	-	^{01 Gly tRNA}
2180843	2180914	-	72	18308982	CPEt028	-	^{01 Gly tRNA}
2180923	2180995	-	73	18308982	CPEt029	-	^{17 Phe tRNA}
2280669	2280751	-	83	18308982	CPEt030	-	^{15 Leu tRNA}
2480320	2480392	-	73	18308982	CPEt031	-	^{20 Trp tRNA}
2480424	2480496	-	73	18308982	CPEt032	-	^{20 Trp tRNA}
2500163	2500245	-	83	18308982	CPEt033	-	^{18 Tyr tRNA}
2500254	2500326	-	73	18308982	CPEt034	-	^{12 Thr tRNA}
2500354	2500436	-	83	18308982	CPEt035	-	^{18 Tyr tRNA}
2500445	2500517	-	73	18308982	CPEt036	-	^{12 Thr tRNA}
2500539	2500611	-	73	18308982	CPEt037	-	^{13 Val tRNA}
2500619	2500701	-	83	18308982	CPEt038	-	^{18 Tyr tRNA}
2500710	2500782	-	73	18308982	CPEt039	-	^{12 Thr tRNA}
2564379	2564450	-	72	18308982	CPEt040	-	^{07 Asn tRNA}
2564505	2567408	-	2904	18308982	CPEr022	-	23S ribosomal RNA
2567512	2567585	-	74	18308982	CPEt041	-	^{14 Ile tRNA}
2567594	2567666	-	73	18308982	CPEt042	-	^{02 Ala tRNA}
2567831	2569336	-	1506	18308982	CPEr023	-	16S ribosomal RNA
2574364	2574436	-	73	18308982	CPEt043	-	^{10 Lys tRNA}
2574446	2574559	-	114	18308982	CPEr024	-	5S ribosomal RNA
2574611	2577514	-	2904	18308982	CPEr025	-	23S ribosomal RNA
2577618	2577691	-	74	18308982	CPEt044	-	^{14 Ile tRNA}
2577700	2577772	-	73	18308982	CPEt045	-	^{02 Ala tRNA}
2577937	2579442	-	1506	18308982	CPEr026	-	16S ribosomal RNA
2584130	2584203	-	74	18308982	CPEt046	-	^{11 Arg tRNA}
2584255	2584325	-	71	18308982	CPEt047	-	^{01 Gly tRNA}
2584332	2584403	-	72	18308982	CPEt048	-	^{01 Gly tRNA}
2584430	2584510	-	81	18308982	CPEt049	-	^{15 Leu tRNA}
2584524	2584596	-	73	18308982	CPEt050	-	^{10 Lys tRNA}
2584607	2584678	-	72	18308982	CPEt051	-	^{05 Gln tRNA}
2584687	2584759	-	73	18308982	CPEt052	-	^{09 His tRNA}
2584767	2584840	-	74	18308982	CPEt053	-	^{11 Arg tRNA}
2584879	2584949	-	71	18308982	CPEt054	-	^{01 Gly tRNA}
2584956	2585027	-	72	18308982	CPEt055	-	^{01 Gly tRNA}
2585057	2585137	-	81	18308982	CPEt056	-	^{15 Leu tRNA}
2585151	2585223	-	73	18308982	CPEt057	-	^{10 Lys tRNA}
2585246	2585318	-	73	18308982	CPEt058	-	^{10 Lys tRNA}
2585328	2585399	-	72	18308982	CPEt059	-	^{05 Gln tRNA}
2585406	2585478	-	73	18308982	CPEt060	-	^{09 His tRNA}
2585486	2585559	-	74	18308982	CPEt061	-	^{11 Arg tRNA}
2585642	2585712	-	71	18308982	CPEt062	-	^{01 Gly tRNA}
2585720	2585792	-	73	18308982	CPEt063	-	^{03 Pro tRNA}
2666286	2666358	-	73	18308982	CPEt064	-	^{10 Lys tRNA}
2666406	2666476	-	71	18308982	CPEt065	-	^{01 Gly tRNA}
2666545	2666614	-	70	18308982	CPEt066	-	^{10 Lys tRNA}
2666621	2666694	-	74	18308982	CPEt067	-	^{11 Arg tRNA}
2669879	2669951	-	73	18308982	CPEt068	-	^{10 Lys tRNA}
2669974	2670044	-	71	18308982	CPEt069	-	^{01 Gly tRNA}
2670053	2670124	-	72	18308982	CPEt070	-	^{01 Gly tRNA}
2670145	2670215	-	71	18308982	CPEt071	-	^{01 Gly tRNA}
2670224	2670304	-	81	18308982	CPEt072	-	^{15 Leu tRNA}
2770593	2770665	-	73	18308982	CPEt073	-	^{12 Thr tRNA}
2805185	2805256	-	72	18308982	CPEt074	-	^{19 Cys tRNA}
2805264	2805336	-	73	18308982	CPEt075	-	^{17 Phe tRNA}
2806412	2806531	-	120	18308982	CPEr030	-	5S ribosomal RNA
2806537	2806608	-	72	18308982	CPEt076	-	^{07 Asn tRNA}
2806619	2806732	-	114	18308982	CPEr027	-	5S ribosomal RNA
2806783	2809686	-	2904	18308982	CPEr028	-	23S ribosomal RNA
2809789	2809862	-	74	18308982	CPEt077	-	^{14 Ile tRNA}
2809871	2809943	-	73	18308982	CPEt078	-	^{02 Ala tRNA}
2810107	2811612	-	1506	18308982	CPEr029	-	16S ribosomal RNA
2820640	2820711	-	72	18308982	CPEt079	-	^{07 Asn tRNA}
2833771	2833856	-	86	18308982	CPEt080	-	^{15 Leu tRNA}
2833876	2833949	-	74	18308982	CPEt081	-	^{16 Met tRNA}
2833956	2834028	-	73	18308982	CPEt082	-	^{16 Met tRNA}
2834039	2834124	-	86	18308982	CPEt083	-	^{15 Leu tRNA}
2834144	2834217	-	74	18308982	CPEt084	-	^{16 Met tRNA}
2834224	2834296	-	73	18308982	CPEt085	-	^{16 Met tRNA}
2834306	2834391	-	86	18308982	CPEt086	-	^{15 Leu tRNA}
2990266	2990338	-	73	18308982	CPEt087	-	^{12 Thr tRNA}
2990345	2990418	-	74	18308982	CPEt088	-	^{06 Asp tRNA}
2990433	2990505	-	73	18308982	CPEt089	-	^{13 Val tRNA}
2990515	2990586	-	72	18308982	CPEt090	-	^{04 Glu tRNA}
2990595	2990668	-	74	18308982	CPEt091	-	^{06 Asp tRNA}
2990686	2990758	-	73	18308982	CPEt092	-	^{13 Val tRNA}
2990768	2990839	-	72	18308982	CPEt093	-	^{04 Glu tRNA}
2990850	2990923	-	74	18308982	CPEt094	-	^{06 Asp tRNA}
2990940	2991012	-	73	18308982	CPEt095	-	^{13 Val tRNA}
2991020	2991089	-	70	18308982	CPEt096	-	^{10 Lys tRNA}