Геном прокариот/Материалы:NC 003450
(перенаправлено с «Материалы:NC 003450»)
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Базовый уровень статей |
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LOCUS NC_003450 3309401 bp DNA circular BCT 14-DEC-2006
DEFINITION Corynebacterium glutamicum ATCC 13032, complete genome.
ACCESSION NC_003450
VERSION NC_003450.3 GI:58036263
KEYWORDS .
SOURCE Corynebacterium glutamicum ATCC 13032
ORGANISM Corynebacterium glutamicum ATCC 13032
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
Corynebacterineae; Corynebacteriaceae; Corynebacterium.
REFERENCE 1 (bases 1 to 3309401)
AUTHORS Nakagawa,S.
TITLE The complete genome sequencing of Corynebacterium glutamicum ATCC
13032
JOURNAL (in) PROCEEDINGS OF THE 9TH INTERNATIONAL SYMPOSIUM ON THE GENETICS
OF INDUSTRIAL MICROORGANISMS:21;
(?)
REFERENCE 2 (bases 1 to 3309401)
AUTHORS Ikeda,M. and Nakagawa,S.
TITLE The Corynebacterium glutamicum genome: features and impacts on
biotechnological processes
JOURNAL Appl. Microbiol. Biotechnol. 62 (2-3), 99-109 (2003)
PUBMED 12743753
REFERENCE 3 (bases 1 to 3309401)
AUTHORS NCBI Genomes Project.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 3309401)
AUTHORS Nakagawa,S.
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2002) Tokyo Research Laboratories, Kogyo Co.
Ltd., 3-6-6 Asahi-machi, Machida, Tokyo 194-8533, Japan
REFERENCE 5 (bases 1 to 3309401)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BA000036.
On Jan 21, 2005 this sequence version replaced gi:23308765.
Genome re-annotation resulted from the combination of the
Corynebacterium glutamicum complete genomes deposited in GenBank
Accession Numbers BA000036 and NC_003450. First version of
NC_003450 was annotated by NCBI staff using the GenMark HMM
prediction program and BLAST analysis results. Cgl#### systematic
gene names were used but the same gene names were later re-used in
BA000036 record. To avoid the confusion in the the present record
NCgl#### refers to the new systematic gene name for the revised
version of the Corynebacterium glutamicum genome, whereas, Cgl####
refers to the corresponding gene in the Corynebacterium glutamicum
complete genome deposited at GenBank Accession Number BA000036.
COMPLETENESS: full length.
Расположение РНК
править| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 14851 | 14927 | + | 77 | 58036263 | NCg1t01 | - | 14 Ile tRNA |
| 14939 | 15011 | + | 73 | 58036263 | NCg1t02 | - | 02 Ala tRNA |
| 23500 | 23572 | + | 73 | 58036263 | NCg1t03 | - | 02 Ala tRNA |
| 23903 | 23979 | + | 77 | 58036263 | NCg1t04 | - | 14 Ile tRNA |
| 23991 | 24063 | + | 73 | 58036263 | NCg1t05 | - | 02 Ala tRNA |
| 49705 | 49791 | + | 87 | 58036263 | NCg1t06 | - | 15 Leu tRNA |
| 76643 | 78166 | + | 1524 | 58036263 | NCg1r01 | - | 16S ribosomal RNA |
| 78555 | 81641 | + | 3087 | 58036263 | NCg1r02 | - | 23S ribosomal RNA |
| 81754 | 81873 | + | 120 | 58036263 | NCg1r03 | - | 5S ribosomal RNA |
| 221750 | 221837 | + | 88 | 58036263 | NCg1t07 | - | 08 Ser tRNA |
| 233409 | 233497 | + | 89 | 58036263 | NCg1t08 | - | 08 Ser tRNA |
| 233527 | 233602 | + | 76 | 58036263 | NCg1t09 | - | 11 Arg tRNA |
| 241637 | 241709 | + | 73 | 58036263 | NCg1t10 | - | 11 Arg tRNA |
| 244294 | 244384 | + | 91 | 58036263 | NCg1t11 | - | 08 Ser tRNA |
| 256222 | 256309 | - | 88 | 58036263 | NCg1t12 | - | 08 Ser tRNA |
| 292466 | 292542 | - | 77 | 58036263 | NCg1t13 | - | 03 Pro tRNA |
| 329629 | 329704 | + | 76 | 58036263 | NCg1t14 | - | 12 Thr tRNA |
| 495199 | 495284 | + | 86 | 58036263 | NCg1t15 | - | 18 Tyr tRNA |
| 495904 | 495976 | + | 73 | 58036263 | NCg1t16 | - | 12 Thr tRNA |
| 496229 | 496301 | + | 73 | 58036263 | NCg1t17 | - | 12 Thr tRNA |
| 496340 | 496414 | + | 75 | 58036263 | NCg1t18 | - | 16 Met tRNA |
| 496508 | 496583 | + | 76 | 58036263 | NCg1t19 | - | 20 Trp tRNA |
| 832667 | 832743 | + | 77 | 58036263 | NCg1t20 | - | 16 Met tRNA |
| 847074 | 847449 | + | 376 | 58036263 | NcG10s01 | - | 10Sa RNA (tmRNA) |
| 848352 | 848428 | + | 77 | 58036263 | NCg1t21 | - | 16 Met tRNA |
| 856119 | 857643 | + | 1525 | 58036263 | NCg1r04 | - | 16S ribosomal RNA |
| 858034 | 861112 | + | 3079 | 58036263 | NCg1r05 | - | 23S ribosomal RNA |
| 861223 | 861342 | + | 120 | 58036263 | NCg1r07 | - | 5S ribosomal RNA |
| 897227 | 897302 | - | 76 | 58036263 | NCg1t22 | - | 11 Arg tRNA |
| 1018251 | 1018325 | - | 75 | 58036263 | NCg1t23 | - | 05 Gln tRNA |
| 1038513 | 1038589 | + | 77 | 58036263 | NCg1t24 | - | 15 Leu tRNA |
| 1236396 | 1236468 | - | 73 | 58036263 | NCg1t25 | - | 11 Arg tRNA |
| 1365593 | 1365664 | + | 72 | 58036263 | NCg1t26 | - | 05 Gln tRNA |
| 1365703 | 1365775 | + | 73 | 58036263 | NCg1t27 | - | 04 Glu tRNA |
| 1365842 | 1365913 | + | 72 | 58036263 | NCg1t28 | - | 05 Gln tRNA |
| 1365951 | 1366023 | + | 73 | 58036263 | NCg1t29 | - | 04 Glu tRNA |
| 1367573 | 1367648 | + | 76 | 58036263 | NCg1t30 | - | 04 Glu tRNA |
| 1413565 | 1413641 | - | 77 | 58036263 | NCg1t31 | - | 15 Leu tRNA |
| 1479364 | 1480887 | + | 1524 | 58036263 | NCg1r08 | - | 16S ribosomal RNA |
| 1481278 | 1484363 | + | 3086 | 58036263 | NCg1r09 | - | 23S ribosomal RNA |
| 1484476 | 1484595 | + | 120 | 58036263 | NCg1r10 | - | 5S ribosomal RNA |
| 1515223 | 1515299 | - | 77 | 58036263 | NCg1t32 | - | 03 Pro tRNA |
| 1609422 | 1609507 | + | 86 | 58036263 | NCg1t33 | - | 15 Leu tRNA |
| 1609594 | 1609682 | + | 89 | 58036263 | NCg1t34 | - | 15 Leu tRNA |
| 1775673 | 1775748 | - | 76 | 58036263 | NCg1t35 | - | 01 Gly tRNA |
| 1775782 | 1775856 | - | 75 | 58036263 | NCg1t36 | - | 13 Val tRNA |
| 1775867 | 1775937 | - | 71 | 58036263 | NCg1t37 | - | 19 Cys tRNA |
| 1775979 | 1776051 | - | 73 | 58036263 | NCg1t38 | - | 01 Gly tRNA |
| 1776085 | 1776159 | - | 75 | 58036263 | NCg1t39 | - | 13 Val tRNA |
| 1776193 | 1776265 | - | 73 | 58036263 | NCg1t40 | - | 01 Gly tRNA |
| 1776613 | 1776684 | + | 72 | 58036263 | NCg1t41 | - | 13 Val tRNA |
| 2370920 | 2371315 | - | 396 | 58036263 | NcG10s02 | - | Rnase P, RNA component |
| 2378693 | 2378768 | - | 76 | 58036263 | NCg1t42 | - | 13 Val tRNA |
| 2394989 | 2395065 | - | 77 | 58036263 | NCg1t43 | - | 16 Met tRNA |
| 2396847 | 2396922 | + | 76 | 58036263 | NCg1t44 | - | 07 Asn tRNA |
| 2397058 | 2397133 | + | 76 | 58036263 | NCg1t45 | - | 07 Asn tRNA |
| 2558223 | 2558296 | - | 74 | 58036263 | NCg1t46 | - | 03 Pro tRNA |
| 2560605 | 2560679 | - | 75 | 58036263 | NCg1t47 | - | 01 Gly tRNA |
| 2601021 | 2601097 | + | 77 | 58036263 | NCg1t48 | - | 11 Arg tRNA |
| 2602958 | 2603033 | + | 76 | 58036263 | NCg1t49 | - | 09 His tRNA |
| 2622648 | 2622723 | + | 76 | 58036263 | NCg1t50 | - | 10 Lys tRNA |
| 2622811 | 2622883 | + | 73 | 58036263 | NCg1t51 | - | 10 Lys tRNA |
| 2650244 | 2650328 | - | 85 | 58036263 | NCg1t52 | - | 15 Leu tRNA |
| 2687225 | 2687300 | - | 76 | 58036263 | NCg1t53 | - | 02 Ala tRNA |
| 2703712 | 2703831 | - | 120 | 58036263 | NCg1r11 | - | 5S ribosomal RNA |
| 2703948 | 2707034 | - | 3087 | 58036263 | NCg1r12 | - | 23S ribosomal RNA |
| 2707425 | 2708948 | - | 1524 | 58036263 | NCg1r13 | - | 16S ribosomal RNA |
| 2712579 | 2712698 | - | 120 | 58036263 | NCg1r14 | - | 5S ribosomal RNA |
| 2712815 | 2715901 | - | 3087 | 58036263 | NCg1r15 | - | 23S ribosomal RNA |
| 2716292 | 2717815 | - | 1524 | 58036263 | NCg1r16 | - | 16S ribosomal RNA |
| 2724174 | 2724249 | - | 76 | 58036263 | NCg1t54 | - | 17 Phe tRNA |
| 2724282 | 2724355 | - | 74 | 58036263 | NCg1t55 | - | 06 Asp tRNA |
| 2727078 | 2727151 | - | 74 | 58036263 | NCg1t56 | - | 06 Asp tRNA |
| 2727190 | 2727265 | - | 76 | 58036263 | NCg1t57 | - | 04 Glu tRNA |
| 2729135 | 2729207 | - | 73 | 58036263 | NCg1t58 | - | 10 Lys tRNA |
| 2790759 | 2790834 | - | 76 | 58036263 | NCg1t59 | - | 12 Thr tRNA |
| 3037551 | 3037624 | + | 74 | 58036263 | NCg1t60 | - | 01 Gly tRNA |
| 3145971 | 3146090 | - | 120 | 58036263 | NCg1r17 | - | 5S ribosomal RNA |
| 3146203 | 3149288 | - | 3086 | 58036263 | NCg1r18 | - | 23S ribosomal RNA |
| 3149679 | 3151202 | - | 1524 | 58036263 | NCg1r19 | - | 16S ribosomal RNA |