Геном прокариот/Материалы:NC 004193

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_004193            3630528 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Oceanobacillus iheyensis HTE831, complete genome.
   ACCESSION   NC_004193
   VERSION     NC_004193.1  GI:23097455
   KEYWORDS    .
   SOURCE      Oceanobacillus iheyensis HTE831
     ORGANISM  Oceanobacillus iheyensis HTE831
               Bacteria; Firmicutes; Bacillales; Bacillaceae; Oceanobacillus.
   REFERENCE   1  (bases 1 to 3630528)
     AUTHORS   Takami,H., Takaki,Y. and Uchiyama,I.
     TITLE     Genome sequence of Oceanobacillus iheyensis isolated from the Iheya
               Ridge and its unexpected adaptive capabilities to extreme
               environments
     JOURNAL   Nucleic Acids Res. 30 (18), 3927-3935 (2002)
      PUBMED   12235376
   REFERENCE   2
     AUTHORS   Lu,J., Nogi,Y. and Takami,H.
     TITLE     Oceanobacillus iheyensis gen. nov., sp. nov., a deep-sea extremely
               halotolerant and alkaliphilic species isolated from a depth of 1050
               m on the Iheya Ridge
     JOURNAL   FEMS Microbiol. Lett. 205 (2), 291-297 (2001)
      PUBMED   11750818
   REFERENCE   3  (bases 1 to 3630528)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 3630528)
     AUTHORS   NCBI Microbial Genomes Annotation Project.
     TITLE     Direct Submission
     JOURNAL   Submitted (24-FEB-2003) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
               reference sequence was derived from BA000028.
               COMPLETENESS: full length.
               REFSEQ gene predictions performed by GeneMark 2.4/GeneMark.hmm 2.0
               with comparison to original submitter provided annotation.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
21773	21845	+	73	23097455	OB3543	-	^{11 Arg tRNA}
30819	31088	+	270	23097455	OB3544	-	signal recognition particle-like scRNA
70197	70273	-	77	23097455	OB3545	-	^{16 Met tRNA}
91493	93058	+	1566	23097455	OB3546	-	16S ribosomal RNA
93292	96213	+	2922	23097455	OB3568	-	23S ribosomal RNA
96347	96462	+	116	23097455	OB3569	-	5S ribosomal RNA
96468	96543	+	76	23097455	OB3547	-	^{13 Val tRNA}
96545	96620	+	76	23097455	OB3570	-	^{12 Thr tRNA}
96669	96744	+	76	23097455	OB3571	-	^{10 Lys tRNA}
96749	96833	+	85	23097455	OB3571.1	-	^{15 Leu tRNA}
96851	96925	+	75	23097455	OB3572	-	^{01 Gly tRNA}
96931	97019	+	89	23097455	OB3573	-	^{15 Leu tRNA}
97023	97099	+	77	23097455	OB3574	-	^{11 Arg tRNA}
97101	97177	+	77	23097455	OB3575	-	^{03 Pro tRNA}
97197	97272	+	76	23097455	OB3576	-	^{02 Ala tRNA}
97474	99039	+	1566	23097455	OB3548	-	16S ribosomal RNA
99273	102194	+	2922	23097455	OB3577	-	23S ribosomal RNA
102328	102443	+	116	23097455	OB3578	-	5S ribosomal RNA
102449	102524	+	76	23097455	OB3549	-	^{13 Val tRNA}
102526	102601	+	76	23097455	OB3579	-	^{12 Thr tRNA}
102650	102725	+	76	23097455	OB3580	-	^{10 Lys tRNA}
102730	102814	+	85	23097455	OB3581	-	^{15 Leu tRNA}
102832	102906	+	75	23097455	OB3582	-	^{01 Gly tRNA}
102912	103000	+	89	23097455	OB3583	-	^{15 Leu tRNA}
103004	103080	+	77	23097455	OB3584	-	^{11 Arg tRNA}
103082	103158	+	77	23097455	OB3585	-	^{03 Pro tRNA}
103178	103253	+	76	23097455	OB3586	-	^{02 Ala tRNA}
103455	105020	+	1566	23097455	OB3550	-	16S ribosomal RNA
105254	108175	+	2922	23097455	OB3587	-	23S ribosomal RNA
108308	108423	+	116	23097455	OB3588	-	5S ribosomal RNA
214375	215940	+	1566	23097455	OB3551	-	16S ribosomal RNA
216167	216243	+	77	23097455	OB3552	-	^{14 Ile tRNA}
216263	216335	+	73	23097455	OB3589	-	^{02 Ala tRNA}
216474	219395	+	2922	23097455	OB3590	-	23S ribosomal RNA
219470	219585	+	116	23097455	OB3591	-	5S ribosomal RNA
219619	219693	+	75	23097455	OB3553	-	^{07 Asn tRNA}
219697	219770	+	74	23097455	OB3592	-	^{12 Thr tRNA}
244280	244354	+	75	23097455	OB3554	-	^{04 Glu tRNA}
244362	244437	+	76	23097455	OB3593	-	^{13 Val tRNA}
244748	244823	+	76	23097455	OB3594	-	^{12 Thr tRNA}
244873	244956	+	84	23097455	OB3595	-	^{18 Tyr tRNA}
244968	245042	+	75	23097455	OB3596	-	^{05 Gln tRNA}
245112	245187	+	76	23097455	OB3596.1	-	^{10 Lys tRNA}
530653	530725	-	73	23097455	OB3555	-	^{02 Ala tRNA}
662215	662289	+	75	23097455	OB3556	-	^{07 Asn tRNA}
662295	662385	+	91	23097455	OB3597	-	^{08 Ser tRNA}
662405	662476	+	72	23097455	OB3598	-	^{04 Glu tRNA}
662500	662576	+	77	23097455	OB3599	-	^{06 Asp tRNA}
662582	662656	+	75	23097455	OB3600	-	^{05 Gln tRNA}
663036	663111	+	76	23097455	OB3601	-	^{10 Lys tRNA}
663116	663199	+	84	23097455	OB3602	-	^{15 Leu tRNA}
669868	669944	+	77	23097455	OB3602.1	-	^{11 Arg tRNA}
669946	670022	+	77	23097455	OB3603	-	^{03 Pro tRNA}
670052	670125	+	74	23097455	OB3604	-	^{01 Gly tRNA}
670131	670207	+	77	23097455	OB3605	-	^{14 Ile tRNA}
670417	671982	+	1566	23097455	OB3557	-	16S ribosomal RNA
672254	675175	+	2922	23097455	OB3606	-	23S ribosomal RNA
675301	675416	+	116	23097455	OB3606.1	-	5S ribosomal RNA
679269	679384	+	116	23097455	OB3558	-	5S ribosomal RNA
679472	679548	+	77	23097455	OB3559	-	^{16 Met tRNA}
679625	679701	+	77	23097455	OB3608	-	^{06 Asp tRNA}
957735	959300	+	1566	23097455	OB3560	-	16S ribosomal RNA
959534	962455	+	2922	23097455	OB3609	-	23S ribosomal RNA
962589	962704	+	116	23097455	OB3610	-	5S ribosomal RNA
962780	962854	+	75	23097455	OB3561	-	^{07 Asn tRNA}
962856	962947	+	92	23097455	OB3611	-	^{08 Ser tRNA}
962957	963031	+	75	23097455	OB3612	-	^{04 Glu tRNA}
963042	963117	+	76	23097455	OB3613	-	^{13 Val tRNA}
963144	963220	+	77	23097455	OB3614	-	^{16 Met tRNA}
963230	963306	+	77	23097455	OB3615	-	^{06 Asp tRNA}
963339	963411	+	73	23097455	OB3616	-	^{17 Phe tRNA}
963427	963510	+	84	23097455	OB3617	-	^{18 Tyr tRNA}
963526	963599	+	74	23097455	OB3618	-	^{20 Trp tRNA}
963605	963677	+	73	23097455	OB3619	-	^{09 His tRNA}
963702	963776	+	75	23097455	OB3620	-	^{05 Gln tRNA}
963779	963853	+	75	23097455	OB3621	-	^{01 Gly tRNA}
963862	963935	+	74	23097455	OB3622	-	^{19 Cys tRNA}
963940	964021	+	82	23097455	OB3623	-	^{15 Leu tRNA}
1131160	1131233	+	74	23097455	OB3562	-	^{01 Gly tRNA}
1283782	1283854	+	73	23097455	OB3563	-	^{13 Val tRNA}
1959372	1959444	-	73	23097455	OB3564	-	^{17 Phe tRNA}
1959597	1959689	-	93	23097455	OB3624	-	^{08 Ser tRNA}
1959703	1959779	-	77	23097455	OB3625	-	^{16 Met tRNA}
1959806	1959881	-	76	23097455	OB3626	-	^{09 His tRNA}
1959895	1959971	-	77	23097455	OB3627	-	^{16 Met tRNA}
1959973	1960047	-	75	23097455	OB3628	-	^{07 Asn tRNA}
2138920	2138993	-	74	23097455	OB2103.1	-	^{11 Arg tRNA}
2138999	2139072	-	74	23097455	OB2103.2	-	^{01 Gly tRNA}
2350002	2350117	-	116	23097455	OB3565	-	5S ribosomal RNA
2350390	2353311	-	2922	23097455	OB3629	-	23S ribosomal RNA
2353644	2355210	-	1567	23097455	OB3630	-	16S ribosomal RNA
2513103	2513181	-	79	23097455	OB3566	-	^{11 Arg tRNA}