Геном прокариот/Материалы:NC 004461

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_004461            2499279 bp    DNA     circular BCT 16-DEC-2005
   DEFINITION  Staphylococcus epidermidis ATCC 12228, complete genome.
   ACCESSION   NC_004461
   VERSION     NC_004461.1  GI:27466918
   KEYWORDS    .
   SOURCE      Staphylococcus epidermidis ATCC 12228
     ORGANISM  Staphylococcus epidermidis ATCC 12228
               Bacteria; Firmicutes; Bacillales; Staphylococcus.
   REFERENCE   1  (bases 1 to 2499279)
     AUTHORS   Zhang,Y.Q., Ren,S.X., Li,H.L., Wang,Y.X., Fu,G., Yang,J., Qin,Z.Q.,
               Miao,Y.G., Wang,W.Y., Chen,R.S., Shen,Y., Chen,Z., Yuan,Z.H.,
               Zhao,G.P., Qu,D., Danchin,A. and Wen,Y.M.
     TITLE     Genome-based analysis of virulence genes in a non-biofilm-forming
               Staphylococcus epidermidis strain (ATCC 12228)
     JOURNAL   Mol. Microbiol. 49 (6), 1577-1593 (2003)
      PUBMED   12950922
   REFERENCE   2  (bases 1 to 2499279)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2499279)
     AUTHORS   Zhang,Y., Ren,S., Li,H., Fu,G., Lu,L., Lu,G., Jia,J., Tu,Y.,
               Qin,Z., Chen,Z. and Wen,Y.
     TITLE     Direct Submission
     JOURNAL   Submitted (05-NOV-2002) Chinese National Human Genome Center at
               Shanghai, 250 Bi Bo Road, Shanghai 201203, China
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE015929.
               COMPLETENESS: full length.

Расположение РНК править

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
24274	24348	+	75	27466918	SEt01	-	^{04 Glu tRNA}
24354	24426	+	73	27466918	SEt02	-	^{06 Asp tRNA}
547813	547884	-	72	27466918	SEt03	-	^{11 Arg tRNA}
720642	720716	+	75	27466918	SEt04	-	^{07 Asn tRNA}
720720	720808	+	89	27466918	SEt05	-	^{08 Ser tRNA}
841654	841730	-	77	27466918	SEt06	-	^{11 Arg tRNA}
1558067	1558155	-	89	27466918	SEt07	-	^{08 Ser tRNA}
1558209	1558280	-	72	27466918	SEt08	-	^{04 Glu tRNA}
1558282	1558356	-	75	27466918	SEt09	-	^{07 Asn tRNA}
1558366	1558439	-	74	27466918	SEt10	-	^{01 Gly tRNA}
1558457	1558532	-	76	27466918	SEt11	-	^{09 His tRNA}
1558546	1558618	-	73	27466918	SEt12	-	^{17 Phe tRNA}
1558629	1558704	-	76	27466918	SEt13	-	^{06 Asp tRNA}
1558719	1558792	-	74	27466918	SEt14	-	^{16 Met tRNA}
1592022	1592105	-	84	27466918	SEt15	-	^{15 Leu tRNA}
1592146	1592220	-	75	27466918	SEt16	-	^{01 Gly tRNA}
1592232	1592306	-	75	27466918	SEt17	-	^{01 Gly tRNA}
1592321	1592395	-	75	27466918	SEt18	-	^{01 Gly tRNA}
1592405	1592478	-	74	27466918	SEt19	-	^{19 Cys tRNA}
1592484	1592555	-	72	27466918	SEt20	-	^{05 Gln tRNA}
1592567	1592639	-	73	27466918	SEt21	-	^{09 His tRNA}
1592642	1592715	-	74	27466918	SEt22	-	^{20 Trp tRNA}
1592724	1592807	-	84	27466918	SEt23	-	^{18 Tyr tRNA}
1592812	1592887	-	76	27466918	SEt24	-	^{12 Thr tRNA}
1592896	1592968	-	73	27466918	SEt25	-	^{17 Phe tRNA}
1593073	1593146	-	74	27466918	SEt26	-	^{16 Met tRNA}
1593158	1593250	-	93	27466918	SEt27	-	^{08 Ser tRNA}
1593288	1593363	-	76	27466918	SEt28	-	^{06 Asp tRNA}
1593371	1593460	-	90	27466918	SEt29	-	^{08 Ser tRNA}
1593470	1593543	-	74	27466918	SEt30	-	^{16 Met tRNA}
1593568	1593644	-	77	27466918	SEt31	-	^{16 Met tRNA}
1593669	1593744	-	76	27466918	SEt32	-	^{02 Ala tRNA}
1593761	1593834	-	74	27466918	SEt33	-	^{03 Pro tRNA}
1593844	1593917	-	74	27466918	SEt34	-	^{11 Arg tRNA}
1593930	1594018	-	89	27466918	SEt35	-	^{15 Leu tRNA}
1594030	1594104	-	75	27466918	SEt36	-	^{01 Gly tRNA}
1594108	1594190	-	83	27466918	SEt37	-	^{15 Leu tRNA}
1594199	1594274	-	76	27466918	SEt38	-	^{10 Lys tRNA}
1594281	1594356	-	76	27466918	SEt39	-	^{12 Thr tRNA}
1594363	1594438	-	76	27466918	SEt40	-	^{13 Val tRNA}
1594449	1594563	-	115	27466918	SEr01	-	5S ribosomal RNA
1594723	1597555	-	2833	27466918	SEr02	-	23S ribosomal RNA
1597741	1597816	-	76	27466918	SEt41	-	^{02 Ala tRNA}
1597837	1597913	-	77	27466918	SEt42	-	^{14 Ile tRNA}
1598006	1599559	-	1554	27466918	SEr03	-	16S ribosomal RNA
1718918	1719032	-	115	27466918	SEr04	-	5S ribosomal RNA
1719192	1722024	-	2833	27466918	SEr05	-	23S ribosomal RNA
1722288	1723841	-	1554	27466918	SEr06	-	16S ribosomal RNA
1723955	1724028	-	74	27466918	SEt43	-	^{01 Gly tRNA}
1724051	1724137	-	87	27466918	SEt44	-	^{15 Leu tRNA}
1807738	1807810	-	73	27466918	SEt45	-	^{10 Lys tRNA}
1807814	1807888	-	75	27466918	SEt46	-	^{05 Gln tRNA}
1807893	1807976	-	84	27466918	SEt47	-	^{18 Tyr tRNA}
1807993	1808068	-	76	27466918	SEt48	-	^{13 Val tRNA}
1808075	1808146	-	72	27466918	SEt49	-	^{04 Glu tRNA}
1808148	1808222	-	75	27466918	SEt50	-	^{07 Asn tRNA}
1808236	1808350	-	115	27466918	SEr07	-	5S ribosomal RNA
1808510	1811337	-	2828	27466918	SEr08	-	23S ribosomal RNA
1811601	1813154	-	1554	27466918	SEr09	-	16S ribosomal RNA
2332475	2332589	-	115	27466918	SEr10	-	5S ribosomal RNA
2332749	2335580	-	2832	27466918	SEr11	-	23S ribosomal RNA
2335764	2335840	-	77	27466918	SEt51	-	^{14 Ile tRNA}
2335936	2337489	-	1554	27466918	SEr12	-	16S ribosomal RNA
2337606	2337681	-	76	27466918	SEt52	-	^{02 Ala tRNA}
2337696	2337769	-	74	27466918	SEt53	-	^{03 Pro tRNA}
2337796	2337872	-	77	27466918	SEt54	-	^{11 Arg tRNA}
2337885	2337973	-	89	27466918	SEt55	-	^{15 Leu tRNA}
2337985	2338059	-	75	27466918	SEt56	-	^{01 Gly tRNA}
2338078	2338150	-	73	27466918	SEt57	-	^{10 Lys tRNA}
2338157	2338232	-	76	27466918	SEt58	-	^{12 Thr tRNA}
2338239	2338314	-	76	27466918	SEt59	-	^{13 Val tRNA}
2338325	2338439	-	115	27466918	SEr13	-	5S ribosomal RNA
2377205	2377319	-	115	27466918	SEr14	-	5S ribosomal RNA
2377479	2380311	-	2833	27466918	SEr15	-	23S ribosomal RNA
2380573	2382126	-	1554	27466918	SEr16	-	16S ribosomal RNA
2389380	2389472	-	93	27466918	SEt60	-	^{08 Ser tRNA}