Материалы:NC 005810

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_005810            4595065 bp    DNA     circular BCT 09-AUG-2006
   DEFINITION  Yersinia pestis biovar Microtus str. 91001, complete genome.
   ACCESSION   NC_005810
   VERSION     NC_005810.1  GI:45439865
   KEYWORDS    .
   SOURCE      Yersinia pestis biovar Microtus str. 91001
     ORGANISM  Yersinia pestis biovar Microtus str. 91001
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Yersinia.
   REFERENCE   1  (bases 1 to 4595065)
     AUTHORS   Zhou,D., Tong,Z., Song,Y., Han,Y., Pei,D., Pang,X., Zhai,J., Li,M.,
               Cui,B., Qi,Z., Jin,L., Dai,R., Du,Z., Wang,J., Guo,Z., Wang,J.,
               Huang,P. and Yang,R.
     TITLE     Genetics of metabolic variations between Yersinia pestis biovars
               and the proposal of a new biovar, microtus
     JOURNAL   J. Bacteriol. 186 (15), 5147-5152 (2004)
      PUBMED   15262951
   REFERENCE   2  (bases 1 to 4595065)
     AUTHORS   Song,Y., Tong,Z., Wang,J., Wang,L., Guo,Z., Han,Y., Zhang,J.,
               Pei,D., Zhou,D., Qin,H., Pang,X., Han,Y., Zhai,J., Li,M., Cui,B.,
               Qi,Z., Jin,L., Dai,R., Chen,F., Li,S., Ye,C., Du,Z., Lin,W.,
               Wang,J., Yu,J., Yang,H., Wang,J., Huang,P. and Yang,R.
     TITLE     Complete genome sequence of Yersinia pestis strain 91001, an
               isolate avirulent to humans
     JOURNAL   DNA Res. 11 (3), 179-197 (2004)
      PUBMED   15368893
   REFERENCE   3  (bases 1 to 4595065)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (11-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 4595065)
     AUTHORS   Song,Y., Tong,Z., Wang,L., Han,Y., Zhang,J., Pei,D., Wang,J.,
               Zhou,D., Han,Y., Pang,X., Zhai,J., Chen,F., Qin,H., Wang,J., Li,S.,
               Guo,Z., Ye,C., Du,Z., Lin,W., Wang,J., Yu,J., Yang,H., Wang,J.,
               Huang,P. and Yang,R.
     TITLE     Direct Submission
     JOURNAL   Submitted (24-APR-2003) The Institute of Microbiology and
               Epidemiology, Academy of Military Medical Sciences, No. 20,
               Dongdajie Street, Fengtai District, Beijing 100071, People's
               Republic of China
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE017042.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
12057	13545	+	1489	45439865	YP_r1	-	16S ribosomal RNA
13709	13784	+	76	45439865	YP_t1	-	^{04 Glu tRNA}
14037	16943	+	2907	45439865	YP_r2	-	23S ribosomal RNA
16943	17176	+	234	45439865	YP_r3	-	5S ribosomal RNA
25674	25777	+	104	45439865	YP_s1	-
245028	246516	+	1489	45439865	YP_r4	-	16S ribosomal RNA
246646	246722	+	77	45439865	YP_t2	-	^{14 Ile tRNA}
246774	246849	+	76	45439865	YP_t3	-	^{02 Ala tRNA}
247068	249974	+	2907	45439865	YP_r5	-	23S ribosomal RNA
249974	250207	+	234	45439865	YP_r6	-	5S ribosomal RNA
407609	407701	+	93	45439865	YP_t4	-	^{08 Ser tRNA}
407710	407786	+	77	45439865	YP_t5	-	^{11 Arg tRNA}
407866	407942	+	77	45439865	YP_t6	-	^{11 Arg tRNA}
529782	529857	-	76	45439865	YP_t7	-	^{17 Phe tRNA}
559750	559825	+	76	45439865	YP_t8	-	^{01 Gly tRNA}
624472	624558	+	87	45439865	YP_t9	-	^{15 Leu tRNA}
624619	624695	+	77	45439865	YP_t11	-	^{16 Met tRNA}
690159	690243	+	85	45439865	YP_t12	-	^{15 Leu tRNA}
704161	705649	+	1489	45439865	YP_r7	-	16S ribosomal RNA
705779	705855	+	77	45439865	YP_t13	-	^{14 Ile tRNA}
705907	705982	+	76	45439865	YP_t14	-	^{02 Ala tRNA}
706201	709107	+	2907	45439865	YP_r8	-	23S ribosomal RNA
709107	709340	+	234	45439865	YP_r9	-	5S ribosomal RNA
856952	857071	-	120	45439865	YP_s2	-
927238	927314	+	77	45439865	YP_t15	-	^{11 Arg tRNA}
946731	946807	+	77	45439865	YP_t16	-	^{03 Pro tRNA}
978845	978920	-	76	45439865	YP_t17	-	^{12 Thr tRNA}
978926	979013	-	88	45439865	YP_t18	-	^{08 Ser tRNA}
980775	980916	-	142	45439865	YP_s3	-
1109581	1109650	-	70	45439865	YP_t19	-	^{10 Lys tRNA}
1109679	1109754	-	76	45439865	YP_t20	-	^{10 Lys tRNA}
1109782	1109857	-	76	45439865	YP_t21	-	^{10 Lys tRNA}
1136978	1137341	-	364	45439865	YP_s4	-
1172313	1172389	+	77	45439865	YP_t22	-	^{16 Met tRNA}
1172397	1172481	+	85	45439865	YP_t23	-	^{15 Leu tRNA}
1172511	1172585	+	75	45439865	YP_t24	-	^{05 Gln tRNA}
1172669	1172743	+	75	45439865	YP_t25	-	^{05 Gln tRNA}
1172776	1172852	+	77	45439865	YP_t26	-	^{16 Met tRNA}
1172858	1172932	+	75	45439865	YP_t27	-	^{05 Gln tRNA}
1466614	1466701	+	88	45439865	YP_t28	-	^{08 Ser tRNA}
1623043	1623118	-	76	45439865	YP_t29	-	^{07 Asn tRNA}
1633790	1633865	-	76	45439865	YP_t30	-	^{07 Asn tRNA}
1673973	1674058	-	86	45439865	YP_t31	-	^{15 Leu tRNA}
1674069	1674142	-	74	45439865	YP_t32	-	^{19 Cys tRNA}
1674195	1674270	-	76	45439865	YP_t33	-	^{01 Gly tRNA}
1680719	1680794	-	76	45439865	YP_t34	-	^{10 Lys tRNA}
1828031	1828106	-	76	45439865	YP_t35	-	^{07 Asn tRNA}
2081356	2081445	-	90	45439865	YP_t36	-	^{08 Ser tRNA}
2089764	2089853	-	90	45439865	YP_t37	-	^{08 Ser tRNA}
2189908	2189992	-	85	45439865	YP_t38	-	^{18 Tyr tRNA}
2425287	2425363	+	77	45439865	YP_t39	-	^{13 Val tRNA}
2425423	2425499	+	77	45439865	YP_t40	-	^{13 Val tRNA}
2701189	2701263	-	75	45439865	YP_t41	-	^{11 Arg tRNA}
2892010	2892085	-	76	45439865	YP_t42	-	^{10 Lys tRNA}
2892285	2892360	-	76	45439865	YP_t43	-	^{13 Val tRNA}
2892405	2892480	-	76	45439865	YP_t44	-	^{13 Val tRNA}
2892517	2892592	-	76	45439865	YP_t45	-	^{13 Val tRNA}
2894514	2894589	+	76	45439865	YP_t46	-	^{02 Ala tRNA}
3072909	3072985	-	77	45439865	YP_t47	-	^{06 Asp tRNA}
3080280	3080356	-	77	45439865	YP_t48	-	^{06 Asp tRNA}
3080474	3080707	-	234	45439865	YP_r10	-	5S ribosomal RNA
3080707	3083613	-	2907	45439865	YP_r11	-	23S ribosomal RNA
3083866	3083941	-	76	45439865	YP_t49	-	^{04 Glu tRNA}
3084105	3085593	-	1489	45439865	YP_r12	-	16S ribosomal RNA
3125728	3126009	-	282	45439865	YP_s5	-
3137997	3138073	+	77	45439865	YP_t50	-	^{16 Met tRNA}
3138197	3138273	+	77	45439865	YP_t51	-	^{16 Met tRNA}
3291134	3291210	-	77	45439865	YP_t52	-	^{16 Met tRNA}
3435670	3435801	-	132	45439865	YP_r13	-	partial 5S rRNA, lacking the first 102 bases
3435834	3435909	-	76	45439865	YP_t53	-	^{12 Thr tRNA}
3435918	3436150	-	233	45439865	YP_r14	-	5S ribosomal RNA
3436150	3439056	-	2907	45439865	YP_r15	-	23S ribosomal RNA
3439275	3439350	-	76	45439865	YP_t54	-	^{02 Ala tRNA}
3439402	3439478	-	77	45439865	YP_t55	-	^{14 Ile tRNA}
3439608	3441096	-	1489	45439865	YP_r16	-	16S ribosomal RNA
3471054	3471129	-	76	45439865	YP_56	-	^{12 Thr tRNA}
3471136	3471210	-	75	45439865	YP_57	-	^{01 Gly tRNA}
3471360	3471444	-	85	45439865	YP_58	-	^{18 Tyr tRNA}
3471463	3471538	-	76	45439865	YP_59	-	^{12 Thr tRNA}
3501166	3501399	-	234	45439865	YP_r17	-	5S ribosomal RNA
3501399	3504305	-	2907	45439865	YP_r18	-	23S ribosomal RNA
3504558	3504633	-	76	45439865	YP_t60	-	^{04 Glu tRNA}
3504797	3506285	-	1489	45439865	YP_r19	-	16S ribosomal RNA
3506403	3506479	+	77	45439865	YP_t61	-	^{06 Asp tRNA}
3506488	3506563	+	76	45439865	YP_t62	-	^{20 Trp tRNA}
3563835	3563911	+	77	45439865	YP_t63	-	^{11 Arg tRNA}
3563995	3564070	+	76	45439865	YP_t64	-	^{09 His tRNA}
3564087	3564173	+	87	45439865	YP_t65	-	^{15 Leu tRNA}
3564249	3564325	+	77	45439865	YP_t66	-	^{03 Pro tRNA}
3665549	3665772	-	224	45439865	YP_r20	-	5S ribosomal RNA
3665772	3668678	-	2907	45439865	YP_r21	-	23S ribosomal RNA
3668897	3668972	-	76	45439865	YP_t67	-	^{02 Ala tRNA}
3669024	3669100	-	77	45439865	YP_t68	-	^{14 Ile tRNA}
3669230	3670718	-	1489	45439865	YP_r22	-	16S ribosomal RNA
3776472	3776548	-	77	45439865	YP_t69	-	^{03 Pro tRNA}
3806782	3806872	-	91	45439865	YP_t70	-	Sec tRNA
3955266	3955341	-	76	45439865	YP_t71	-	^{17 Phe tRNA}
4076418	4076491	-	74	45439865	YP_t72	-	^{01 Gly tRNA}
4106951	4107132	+	182	45439865	YP_s6	-
4277617	4277703	+	87	45439865	YP_t73	-	^{15 Leu tRNA}
4327256	4327632	+	377	45439865	YP_s7	-