Геном прокариот/Материалы:NC 005823

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_005823            4277185 bp    DNA     circular BCT 03-APR-2006
   DEFINITION  Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
               chromosome I, complete sequence.
   ACCESSION   NC_005823
   VERSION     NC_005823.1  GI:45655914
   KEYWORDS    .
   SOURCE      Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
     ORGANISM  Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
               Bacteria; Spirochaetes; Spirochaetales; Leptospiraceae; Leptospira.
   REFERENCE   1  (bases 1 to 4277185)
     AUTHORS   Nascimento,A.L., Ko,A.I., Martins,E.A., Monteiro-Vitorello,C.B.,
               Ho,P.L., Haake,D.A., Verjovski-Almeida,S., Hartskeerl,R.A.,
               Marques,M.V., Oliveira,M.C., Menck,C.F., Leite,L.C., Carrer,H.,
               Coutinho,L.L., Degrave,W.M., Dellagostin,O.A., El-Dorry,H.,
               Ferro,E.S., Ferro,M.I., Furlan,L.R., Gamberini,M., Giglioti,E.A.,
               Goes-Neto,A., Goldman,G.H., Goldman,M.H., Harakava,R.,
               Jeronimo,S.M., Junqueira-De-Azevedo,I.L., Kimura,E.T.,
               Kuramae,E.E., Lemos,E.G., Lemos,M.V., Marino,C.L., Nunes,L.R., De
               Oliveira,R.C., Pereira,G.G., Reis,M.S., Schriefer,A.,
               Siqueira,W.J., Sommer,P., Tsai,S.M., Simpson,A.J., Ferro,J.A.,
               Camargo,L.E., Kitajima,J.P., Setubal,J.C. and Van Sluys,M.A.
     TITLE     Comparative Genomics of Two Leptospira interrogans Serovars Reveals
               Novel Insights into Physiology and Pathogenesis
     JOURNAL   J. Bacteriol. 186 (7), 2164-2172 (2004)
      PUBMED   15028702
   REFERENCE   2  (bases 1 to 4277185)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (11-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4277185)
     AUTHORS   Nascimento,A.L., Ko,A.I., Martins,E.A., Monteiro-Vitorello,C.B.,
               Ho,P.L., Haake,D.A., Verjovski-Almeida,S., Hartskeerl,R.A.,
               Marques,M.V., Oliveira,M.C., Menck,C.F., Leite,L.C., Carrer,H.,
               Coutinho,L.L., Degrave,W.M., Dellagostin,O.A., El-Dorry,H.,
               Ferro,E.S., Ferro,M.I., Furlan,L.R., Gamberini,M., Giglioti,E.A.,
               Goes-Neto,A., Goldman,G.H., Goldman,M.H., Harakava,R.,
               Jeronimo,S.M., Junqueira-De-Azevedo,I.L., Kimura,E.T.,
               Kuramae,E.E., Lemos,E.G., Lemos,M.V., Marino,C.L., Nunes,L.R., De
               Oliveira,R.C., Pereira,G.G., Reis,M.S., Schriefer,A.,
               Siqueira,W.J., Sommer,P., Tsai,S.M., Simpson,A.J., Ferro,J.A.,
               Camargo,L.E., Kitajima,J.P., Setubal,J.C. and Van Sluys,M.A.
     TITLE     Direct Submission
     JOURNAL   Submitted (29-FEB-2004) Laboratorio de Bioinformatica/Instituto de
               Computacao, Universidade Estadual de Campinas, Avenida Albert
               Einstein 1251 Box 6176, Campinas, SP 13084-971, Brasil
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE016823.
               COMPLETENESS: full length.

Расположение РНК править

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
99482	99561	-	80	45655914	LIC10081	-	^{11 Arg tRNA}
100417	100506	-	90	45655914	LIC10084	-	^{08 Ser tRNA}
100517	100603	-	87	45655914	LIC10085	-	^{08 Ser tRNA}
129839	129925	-	87	45655914	LIC10111	-	^{15 Leu tRNA}
184356	184475	+	120	45655914	LIC10153	-	5S ribosomal RNA
304939	305015	-	77	45655914	LIC10267	-	^{11 Arg tRNA}
395988	396062	-	75	45655914	LIC10349	-	^{03 Pro tRNA}
488911	488989	+	79	45655914	LIC10427	-	^{05 Gln tRNA}
511272	511347	-	76	45655914	LIC10447	-	^{13 Val tRNA}
908860	908934	+	75	45655914	LIC10745	-	^{12 Thr tRNA}
908943	909016	+	74	45655914	LIC10746	-	^{20 Trp tRNA}
964700	964776	+	77	45655914	LIC10794	-	^{14 Ile tRNA}
964788	964863	+	76	45655914	LIC10795	-	^{02 Ala tRNA}
1095894	1095981	-	88	45655914	LIC10910	-	^{18 Tyr tRNA}
1095989	1096064	-	76	45655914	LIC10911	-	^{12 Thr tRNA}
1114815	1117775	+	2961	45655914	LIC10928	-	large subunit ribosomal RNA
1230539	1232049	+	1511	45655914	LIC11010	-	16S ribosomal RNA
1490026	1490112	-	87	45655914	LIC11208	-	^{15 Leu tRNA}
1741890	1741964	+	75	45655914	LIC11415	-	^{01 Gly tRNA}
1862433	1863944	+	1512	45655914	LIC11508	-	16S ribosomal RNA
1870605	1870680	-	76	45655914	LIC11513	-	^{02 Ala tRNA}
1949132	1949210	+	79	45655914	LIC11588	-	^{07 Asn tRNA}
2225381	2225469	-	89	45655914	LIC11828	-	^{15 Leu tRNA}
2225486	2225559	-	74	45655914	LIC11829	-	^{19 Cys tRNA}
2303466	2303542	-	77	45655914	LIC11905	-	^{06 Asp tRNA}
2304416	2304501	+	86	45655914	LIC11907	-	^{15 Leu tRNA}
2367510	2367586	+	77	45655914	LIC11961	-	^{16 Met tRNA}
2747134	2747209	+	76	45655914	LIC12274	-	^{16 Met tRNA}
2921290	2921366	+	77	45655914	LIC12409	-	^{16 Met tRNA}
3088355	3088430	-	76	45655914	LIC12549	-	^{17 Phe tRNA}
3112210	3112285	+	76	45655914	LIC12566	-	^{10 Lys tRNA}
3112300	3112377	+	78	45655914	LIC12567	-	^{04 Glu tRNA}
3142461	3142545	-	85	45655914	LIC12593	-	^{15 Leu tRNA}
3421811	3421885	+	75	45655914	LIC12817	-	^{11 Arg tRNA}
3702666	3705626	-	2961	45655914	LIC13035	-	large subunit ribosomal RNA
3786601	3786675	+	75	45655914	LIC13096	-	^{03 Pro tRNA}
3786690	3786769	+	80	45655914	LIC13097	-	^{11 Arg tRNA}
3786783	3786861	+	79	45655914	LIC13098	-	^{09 His tRNA}
3823170	3823249	-	80	45655914	LIC13124	-	^{13 Val tRNA}
3970609	3970683	+	75	45655914	LIC13234	-	^{12 Thr tRNA}
4240074	4240148	+	75	45655914	LIC13465	-	^{01 Gly tRNA}
4248140	4248226	+	87	45655914	LIC13473	-	^{08 Ser tRNA}