Геном прокариот/Материалы:NC 005966

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_005966            3598621 bp    DNA     circular BCT 17-JAN-2006
   DEFINITION  Acinetobacter sp. ADP1, complete genome.
   ACCESSION   NC_005966
   VERSION     NC_005966.1  GI:50083297
   KEYWORDS    complete genome.
   SOURCE      Acinetobacter sp. ADP1
     ORGANISM  Acinetobacter sp. ADP1
               Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
               Moraxellaceae; Acinetobacter.
   REFERENCE   1  (bases 1 to 3598621)
     AUTHORS   Barbe,V., Vallenet,D., Fonknechten,N., Kreimeyer,A., Oztas,S.,
               Labarre,L., Cruveiller,S., Robert,C., Duprat,S., Wincker,P.,
               Ornston,L.N., Weissenbach,J., Marliere,P., Cohen,G.N. and
               Medigue,C.
     TITLE     Unique features revealed by the genome sequence of Acinetobacter
               sp. ADP1, a versatile and naturally transformation competent
               bacterium
     JOURNAL   (er) Nucleic Acids Res. (2004) In press
      PUBMED   15514110
   REFERENCE   2  (bases 1 to 3598621)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3598621)
     AUTHORS   Barbe,V., Vallenet,D., Fonknechten,N., Kreimeyer,A., Oztas,S.,
               Labarre,L., Cruveiller,S., Robert,C., Duprat,S., Wincker,P.,
               Ornston,L.N., Weissenbach,J., Marliere,P., Cohen,G.N. and
               Medigue,C.
     TITLE     Direct Submission
     JOURNAL   Submitted (29-JUN-2004) Genoscope, Centre National de Sequencage,
               BP 191 Evry cedex 91006, France
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CR543861.
               COMPLETENESS: full length.

Расположение РНК править

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
18416	19945	+	1530	50083297	ACIADrRNA16S_1	-	16S
20007	20083	+	77	50083297	ACIADtRNAIle_1	-	^{14 Ile tRNA}
20120	20195	+	76	50083297	ACIADtRNAAla_2	-	^{02 Ala tRNA}
20539	23437	+	2899	50083297	ACIADrRNA23S_2	-	23S
23623	23738	+	116	50083297	ACIADrRNA5S_3	-	5S
145346	145421	-	76	50083297	ACIADtRNAGly_3	-	^{01 Gly tRNA}
145463	145538	-	76	50083297	ACIADtRNAGly_4	-	^{01 Gly tRNA}
213201	214730	+	1530	50083297	ACIADrRNA16S_4	-	16S
214792	214868	+	77	50083297	ACIADtRNAIle_5	-	^{14 Ile tRNA}
214905	214980	+	76	50083297	ACIADtRNAAla_6	-	^{02 Ala tRNA}
215324	218222	+	2899	50083297	ACIADrRNA23S_5	-	23S
218408	218523	+	116	50083297	ACIADrRNA5S_6	-	5S
296755	296830	+	76	50083297	ACIADtRNAThr_7	-	^{12 Thr tRNA}
296889	296972	+	84	50083297	ACIADtRNATyr_8	-	^{18 Tyr tRNA}
297010	297085	+	76	50083297	ACIADtRNAGly_9	-	^{01 Gly tRNA}
297099	297173	+	75	50083297	ACIADtRNAThr_10	-	^{12 Thr tRNA}
298591	298666	+	76	50083297	ACIADtRNATrp_11	-	^{20 Trp tRNA}
357798	357882	+	85	50083297	ACIADtRNALeu_12	-	^{15 Leu tRNA}
358378	358454	+	77	50083297	ACIADtRNAMet_13	-	^{16 Met tRNA}
358542	358618	+	77	50083297	ACIADtRNAMet_14	-	^{16 Met tRNA}
433598	433673	-	76	50083297	ACIADtRNALys_15	-	^{10 Lys tRNA}
433782	433857	-	76	50083297	ACIADtRNALys_16	-	^{10 Lys tRNA}
581949	582035	+	87	50083297	ACIADtRNALeu_17	-	^{15 Leu tRNA}
642743	642819	+	77	50083297	ACIADtRNAPro_18	-	^{03 Pro tRNA}
642880	642956	+	77	50083297	ACIADtRNAArg_19	-	^{11 Arg tRNA}
642995	643070	+	76	50083297	ACIADtRNAHis_20	-	^{09 His tRNA}
643075	643151	+	77	50083297	ACIADtRNAPro_21	-	^{03 Pro tRNA}
646038	647567	+	1530	50083297	ACIADrRNA16S_7	-	16S
647629	647705	+	77	50083297	ACIADtRNAIle_22	-	^{14 Ile tRNA}
647742	647817	+	76	50083297	ACIADtRNAAla_23	-	^{02 Ala tRNA}
648251	651149	+	2899	50083297	ACIADrRNA23S_8	-	23S
651336	651451	+	116	50083297	ACIADrRNA5S_9	-	5S
786125	786200	+	76	50083297	ACIADtRNAVal_24	-	^{13 Val tRNA}
786224	786300	+	77	50083297	ACIADtRNAAsp_25	-	^{06 Asp tRNA}
786348	786424	+	77	50083297	ACIADtRNAAsp_26	-	^{06 Asp tRNA}
786447	786522	+	76	50083297	ACIADtRNAVal_27	-	^{13 Val tRNA}
786558	786634	+	77	50083297	ACIADtRNAAsp_28	-	^{06 Asp tRNA}
786732	786807	+	76	50083297	ACIADtRNAVal_29	-	^{13 Val tRNA}
914849	915208	+	360	50083297	ACIADtmRNA	-	mRNA template for tagging proteins
1135910	1135985	-	76	50083297	ACIADtRNAGlu_30	-	^{04 Glu tRNA}
1136011	1136086	-	76	50083297	ACIADtRNAGlu_31	-	^{04 Glu tRNA}
1139804	1139879	-	76	50083297	ACIADtRNAGlu_32	-	^{04 Glu tRNA}
1140169	1140244	-	76	50083297	ACIADtRNAGlu_33	-	^{04 Glu tRNA}
1148051	1148140	+	90	50083297	ACIADtRNASer_34	-	^{08 Ser tRNA}
1334581	1334665	+	85	50083297	ACIADtRNALeu_35	-	^{15 Leu tRNA}
1334716	1334789	+	74	50083297	ACIADtRNATrp_36	-	^{20 Trp tRNA}
1334814	1334898	+	85	50083297	ACIADtRNALeu_37	-	^{15 Leu tRNA}
1337634	1337709	-	76	50083297	ACIADtRNAAsn_38	-	^{07 Asn tRNA}
1340632	1340707	-	76	50083297	ACIADtRNAAsn_39	-	^{07 Asn tRNA}
1340715	1340790	-	76	50083297	ACIADtRNAAsn_40	-	^{07 Asn tRNA}
1380047	1380144	+	98	50083297	ACIADffsRNA	-	4.5S RNA component of Signal Recognition Particle (SRP)
1478872	1478947	-	76	50083297	ACIADtRNAGly_41	-	^{01 Gly tRNA}
1660700	1662229	+	1530	50083297	ACIADrRNA16S_10	-	16S
1662291	1662367	+	77	50083297	ACIADtRNAIle_42	-	^{14 Ile tRNA}
1662404	1662479	+	76	50083297	ACIADtRNAAla_43	-	^{02 Ala tRNA}
1662823	1665721	+	2899	50083297	ACIADrRNA23S_11	-	23S
1665907	1666022	+	116	50083297	ACIADrRNA5S_12	-	5S
1793951	1794027	+	77	50083297	ACIADtRNAMet_44	-	^{16 Met tRNA}
2034702	2034778	+	77	50083297	ACIADtRNAMet_45	-	^{16 Met tRNA}
2169643	2169719	-	77	50083297	ACIADtRNAVal_46	-	^{13 Val tRNA}
2230240	2230316	+	77	50083297	ACIADtRNAArg_47	-	^{11 Arg tRNA}
2535413	2535488	+	76	50083297	ACIADtRNAAsn_48	-	^{07 Asn tRNA}
2752239	2752328	-	90	50083297	ACIADtRNASer_49	-	^{08 Ser tRNA}
2786083	2786156	+	74	50083297	ACIADtRNACys_50	-	^{19 Cys tRNA}
2786172	2786257	+	86	50083297	ACIADtRNALeu_51	-	^{15 Leu tRNA}
2787951	2788036	+	86	50083297	ACIADtRNALeu_52	-	^{15 Leu tRNA}
2831438	2831514	-	77	50083297	ACIADtRNAMet_53	-	^{16 Met tRNA}
2831743	2831819	-	77	50083297	ACIADtRNAMet_54	-	^{16 Met tRNA}
2831879	2832237	+	359	50083297	ACIADrnpBRNA	-	RNA component of the ribonuclease P
2843775	2843849	+	75	50083297	ACIADtRNAGln_55	-	^{05 Gln tRNA}
2843872	2843946	+	75	50083297	ACIADtRNAGln_56	-	^{05 Gln tRNA}
2843969	2844043	+	75	50083297	ACIADtRNAGln_57	-	^{05 Gln tRNA}
2844061	2844135	+	75	50083297	ACIADtRNAGln_58	-	^{05 Gln tRNA}
2844227	2844301	+	75	50083297	ACIADtRNAGln_59	-	^{05 Gln tRNA}
2899595	2899667	+	73	50083297	ACIADtRNAArg_60	-	^{11 Arg tRNA}
2941950	2942065	-	116	50083297	ACIADrRNA5S_13	-	5S
2942251	2945149	-	2899	50083297	ACIADrRNA23S_14	-	23S
2945584	2945659	-	76	50083297	ACIADtRNAAla_61	-	^{02 Ala tRNA}
2945696	2945772	-	77	50083297	ACIADtRNAIle_62	-	^{14 Ile tRNA}
2945834	2947363	-	1530	50083297	ACIADrRNA16S_15	-	16S
3071047	3071162	-	116	50083297	ACIADrRNA5S_16	-	5S
3071348	3074246	-	2899	50083297	ACIADrRNA23S_17	-	23S
3074681	3074756	-	76	50083297	ACIADtRNAAla_63	-	^{02 Ala tRNA}
3074793	3074869	-	77	50083297	ACIADtRNAIle_64	-	^{14 Ile tRNA}
3074931	3076460	-	1530	50083297	ACIADrRNA16S_18	-	16S
3102414	3102490	-	77	50083297	ACIADtRNAArg_65	-	^{11 Arg tRNA}
3107432	3107508	-	77	50083297	ACIADtRNAArg_66	-	^{11 Arg tRNA}
3107556	3107632	-	77	50083297	ACIADtRNAArg_67	-	^{11 Arg tRNA}
3107644	3107733	-	90	50083297	ACIADtRNASer_68	-	^{08 Ser tRNA}
3281996	3282071	+	76	50083297	ACIADtRNAAla_69	-	^{02 Ala tRNA}
3282097	3282172	+	76	50083297	ACIADtRNAGlu_70	-	^{04 Glu tRNA}
3308631	3308706	-	76	50083297	ACIADtRNAPhe_71	-	^{17 Phe tRNA}
3308833	3308908	-	76	50083297	ACIADtRNAPhe_72	-	^{17 Phe tRNA}
3327459	3327548	+	90	50083297	ACIADtRNASer_73	-	^{08 Ser tRNA}
3361111	3361186	+	76	50083297	ACIADtRNAThr_74	-	^{12 Thr tRNA}
3559459	3559574	-	116	50083297	ACIADrRNA5S_19	-	5S
3559760	3562658	-	2899	50083297	ACIADrRNA23S_20	-	23S
3563003	3563078	-	76	50083297	ACIADtRNAAla_75	-	^{02 Ala tRNA}
3563115	3563191	-	77	50083297	ACIADtRNAIle_76	-	^{14 Ile tRNA}
3563253	3564782	-	1530	50083297	ACIADrRNA16S_21	-	16S