Материалы:NC 007348

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007348            2726152 bp    DNA     circular BCT 19-DEC-2006
   DEFINITION  Ralstonia eutropha JMP134 chromosome 2, complete sequence.
   ACCESSION   NC_007348
   VERSION     NC_007348.1  GI:73537298
   KEYWORDS    .
   SOURCE      Ralstonia eutropha JMP134
     ORGANISM  Ralstonia eutropha JMP134
               Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
               Burkholderiaceae; Cupriavidus.
   REFERENCE   1  (bases 1 to 2726152)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Goltsman,E.,
               Martinez,M., Schmutz,J., Larimer,F., Land,M., Lykidis,A. and
               Richardson,P.
     TITLE     Complete sequence of chromosome 2 of Ralstonia eutropha JMP134
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2726152)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (18-AUG-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2726152)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Goltsman,E.,
               Martinez,M., Schmutz,J., Larimer,F., Land,M., Lykidis,A. and
               Richardson,P.
     TITLE     Direct Submission
     JOURNAL   Submitted (05-AUG-2005) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000091.
               URL -- http://www.jgi.doe.gov
               Source DNA and bacteria available from Bernardo Gonzalez
               (bgonzale@genes.bio.puc.cl)
               Whole genome sequencing and draft assembly at JGI-PGF
               Finishing done by JGI-PGF
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
29407	29482	+	76	73537298	Reut_BR0067	-	^{07 Asn tRNA}
29489	29564	+	76	73537298	Reut_BR0068	-	^{01 Gly tRNA}
29584	29658	+	75	73537298	Reut_BR0069	-	^{12 Thr tRNA}
180337	181864	+	1528	73537298	Reut_BR0070	-	16S ribosomal RNA
181928	182004	+	77	73537298	Reut_BR0071	-	^{14 Ile tRNA}
182016	182091	+	76	73537298	Reut_BR0072	-	^{02 Ala tRNA}
182390	185209	+	2820	73537298	Reut_BR0073	-	23S ribosomal RNA
185392	185504	+	113	73537298	Reut_BR0074	-	5S ribosomal RNA
633245	633331	+	87	73537298	Reut_BR0075	-	^{15 Leu tRNA}
635985	636061	+	77	73537298	Reut_BR0076	-	^{11 Arg tRNA}
1637794	1637880	+	87	73537298	Reut_BR0077	-	^{15 Leu tRNA}
2363711	2365238	+	1528	73537298	Reut_BR0078	-	16S ribosomal RNA
2365302	2365378	+	77	73537298	Reut_BR0079	-	^{14 Ile tRNA}
2365390	2365465	+	76	73537298	Reut_BR0080	-	^{02 Ala tRNA}
2365759	2368578	+	2820	73537298	Reut_BR0081	-	23S ribosomal RNA
2368761	2368873	+	113	73537298	Reut_BR0082	-	5S ribosomal RNA
2371015	2372542	+	1528	73537298	Reut_BR0083	-	16S ribosomal RNA
2372871	2375690	+	2820	73537298	Reut_BR0084	-	23S ribosomal RNA
2375873	2375985	+	113	73537298	Reut_BR0085	-	5S ribosomal RNA
2557163	2557238	+	76	73537298	Reut_BR0086	-	^{16 Met tRNA}