Геном прокариот/Материалы:NC 007350

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007350            2516575 bp    DNA     circular BCT 27-AUG-2007
   DEFINITION  Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,
               complete genome.
   ACCESSION   NC_007350
   VERSION     NC_007350.1  GI:73661309
   KEYWORDS    .
   SOURCE      Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
     ORGANISM  Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
               Bacteria; Firmicutes; Bacillales; Staphylococcus.
   REFERENCE   1
     AUTHORS   Kuroda,M., Yamashita,A., Hirakawa,H., Kumano,M., Morikawa,K.,
               Higashide,M., Maruyama,A., Inose,Y., Matoba,K., Toh,H., Kuhara,S.,
               Hattori,M. and Ohta,T.
     TITLE     Whole genome sequence of Staphylococcus saprophyticus reveals the
               pathogenesis of uncomplicated urinary tract infection
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 102 (37), 13272-13277 (2005)
      PUBMED   16135568
   REFERENCE   2  (bases 1 to 2516575)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (20-AUG-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2516575)
     AUTHORS   Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T.
     TITLE     Direct Submission
     JOURNAL   Submitted (11-MAR-2005) Masahira Hattori, Kitasato Institute for
               Life Sciences; 1-15-1 Kitasato, Sagamihara, Kanagawa, 228-0829,
               Japan (E-mail:hattori@genome.ls.kitasato-u.ac.jp,
               URL:http://genome.ls.kitasato-u.ac.jp, Tel:81-42-778-8194)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP008934.
               This work was done in collaboration with Makoto Kuroda, Miyuki
               Kumano, Kazuya Morikawa, Masato Higashide, Atsushi Maruyama, Yumiko
               Inoue, Kimio Matoba, Toshiko Ohta (University of Tsukuba), Hideki
               Hirakawa, Satoru Kuhara (Kyushu University), and supported by the
               Research for the Future Program of the Japan Society for the
               Promotion of Science.
               COMPLETENESS: full length.

Расположение РНК править

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
25017	25091	+	75	73661309	SSPt01	-	^{04 Glu tRNA}
25098	25170	+	73	73661309	SSPt02	-	^{06 Asp tRNA}
743718	745270	+	1553	73661309	SSPr01	-	16S ribosomal RNA
745554	748476	+	2923	73661309	SSPr02	-	23S ribosomal RNA
748555	748672	+	118	73661309	SSPr03	-	5S ribosomal RNA
748681	748755	+	75	73661309	SSPt03	-	^{07 Asn tRNA}
748760	748831	+	72	73661309	SSPt04	-	^{04 Glu tRNA}
748841	748916	+	76	73661309	SSPt05	-	^{13 Val tRNA}
748935	749018	+	84	73661309	SSPt06	-	^{18 Tyr tRNA}
749023	749097	+	75	73661309	SSPt07	-	^{05 Gln tRNA}
749101	749173	+	73	73661309	SSPt08	-	^{10 Lys tRNA}
841386	841471	+	86	73661309	SSPt09	-	^{15 Leu tRNA}
841494	841567	+	74	73661309	SSPt10	-	^{01 Gly tRNA}
841712	843264	+	1553	73661309	SSPr04	-	16S ribosomal RNA
843547	846469	+	2923	73661309	SSPr05	-	23S ribosomal RNA
846548	846665	+	118	73661309	SSPr06	-	5S ribosomal RNA
846904	847017	+	114	73661309	SSPr07	-	5S ribosomal RNA
959625	961177	+	1553	73661309	SSPr08	-	16S ribosomal RNA
961276	961352	+	77	73661309	SSPt11	-	^{14 Ile tRNA}
961374	961449	+	76	73661309	SSPt12	-	^{02 Ala tRNA}
961643	964565	+	2923	73661309	SSPr09	-	23S ribosomal RNA
964644	964761	+	118	73661309	SSPr10	-	5S ribosomal RNA
964768	964843	+	76	73661309	SSPt13	-	^{13 Val tRNA}
964857	964932	+	76	73661309	SSPt14	-	^{12 Thr tRNA}
964940	965015	+	76	73661309	SSPt15	-	^{10 Lys tRNA}
965032	965113	+	82	73661309	SSPt16	-	^{15 Leu tRNA}
965117	965191	+	75	73661309	SSPt17	-	^{01 Gly tRNA}
965199	965287	+	89	73661309	SSPt18	-	^{15 Leu tRNA}
965303	965379	+	77	73661309	SSPt19	-	^{11 Arg tRNA}
965385	965458	+	74	73661309	SSPt20	-	^{03 Pro tRNA}
965479	965554	+	76	73661309	SSPt21	-	^{02 Ala tRNA}
965580	965656	+	77	73661309	SSPt22	-	^{16 Met tRNA}
965681	965754	+	74	73661309	SSPt23	-	^{16 Met tRNA}
965764	965856	+	93	73661309	SSPt24	-	^{08 Ser tRNA}
965901	965993	+	93	73661309	SSPt25	-	^{08 Ser tRNA}
966007	966080	+	74	73661309	SSPt26	-	^{16 Met tRNA}
966090	966165	+	76	73661309	SSPt27	-	^{06 Asp tRNA}
966174	966246	+	73	73661309	SSPt28	-	^{17 Phe tRNA}
966259	966334	+	76	73661309	SSPt29	-	^{12 Thr tRNA}
966343	966426	+	84	73661309	SSPt30	-	^{18 Tyr tRNA}
966442	966515	+	74	73661309	SSPt31	-	^{20 Trp tRNA}
966518	966590	+	73	73661309	SSPt32	-	^{09 His tRNA}
966602	966673	+	72	73661309	SSPt33	-	^{05 Gln tRNA}
966683	966756	+	74	73661309	SSPt34	-	^{19 Cys tRNA}
966764	966838	+	75	73661309	SSPt35	-	Xaa tRNA
966860	966934	+	75	73661309	SSPt36	-	Xaa tRNA
966944	967018	+	75	73661309	SSPt37	-	^{01 Gly tRNA}
967916	967998	+	83	73661309	SSPt38	-	^{15 Leu tRNA}
1003701	1003774	+	74	73661309	SSPt39	-	^{16 Met tRNA}
1003786	1003861	+	76	73661309	SSPt40	-	^{06 Asp tRNA}
1003872	1003944	+	73	73661309	SSPt41	-	^{17 Phe tRNA}
1003967	1004042	+	76	73661309	SSPt42	-	^{09 His tRNA}
1004056	1004129	+	74	73661309	SSPt43	-	^{01 Gly tRNA}
1004140	1004214	+	75	73661309	SSPt44	-	^{07 Asn tRNA}
1004216	1004287	+	72	73661309	SSPt45	-	^{04 Glu tRNA}
1004327	1004418	+	92	73661309	SSPt46	-	^{08 Ser tRNA}
1707942	1708018	-	77	73661309	SSPt47	-	^{11 Arg tRNA}
1825919	1826007	-	89	73661309	SSPt48	-	^{08 Ser tRNA}
1826010	1826084	-	75	73661309	SSPt49	-	^{07 Asn tRNA}
1972295	1972655	-	361	73661309	SSPt50	-	tmRNA
1989208	1989279	+	72	73661309	SSPt51	-	^{11 Arg tRNA}
2301248	2301365	-	118	73661309	SSPr11	-	5S ribosomal RNA
2301444	2304366	-	2923	73661309	SSPr12	-	23S ribosomal RNA
2304649	2306201	-	1553	73661309	SSPr13	-	16S ribosomal RNA
2306446	2306563	-	118	73661309	SSPr14	-	5S ribosomal RNA
2306642	2309564	-	2923	73661309	SSPr15	-	23S ribosomal RNA
2309753	2309829	-	77	73661309	SSPt52	-	^{14 Ile tRNA}
2309927	2311479	-	1553	73661309	SSPr16	-	16S ribosomal RNA
2311632	2311707	-	76	73661309	SSPt53	-	^{02 Ala tRNA}
2311727	2311800	-	74	73661309	SSPt54	-	^{03 Pro tRNA}
2311828	2311904	-	77	73661309	SSPt55	-	^{11 Arg tRNA}
2311918	2312006	-	89	73661309	SSPt56	-	^{15 Leu tRNA}
2312015	2312089	-	75	73661309	SSPt57	-	^{01 Gly tRNA}
2312104	2312176	-	73	73661309	SSPt58	-	^{10 Lys tRNA}
2312183	2312258	-	76	73661309	SSPt59	-	^{12 Thr tRNA}
2312272	2312347	-	76	73661309	SSPt60	-	^{13 Val tRNA}
2312369	2312486	-	118	73661309	SSPr17	-	5S ribosomal RNA
2350131	2350248	-	118	73661309	SSPr18	-	5S ribosomal RNA
2350327	2353249	-	2923	73661309	SSPr19	-	23S ribosomal RNA
2353532	2355084	-	1553	73661309	SSPr20	-	16S ribosomal RNA
2363772	2363864	-	93	73661309	SSPt61	-	^{08 Ser tRNA}