Материалы:NC 007613

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007613            4519823 bp    DNA     circular BCT 28-JUN-2007
   DEFINITION  Shigella boydii Sb227, complete genome.
   ACCESSION   NC_007613
   VERSION     NC_007613.1  GI:82542618
   KEYWORDS    .
   SOURCE      Shigella boydii Sb227
     ORGANISM  Shigella boydii Sb227
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Shigella.
   REFERENCE   1  (bases 1 to 4519823)
     AUTHORS   Yang,F., Yang,J., Zhang,X., Chen,L., Jiang,Y., Yan,Y., Tang,X.,
               Wang,J., Xiong,Z., Dong,J., Xue,Y., Zhu,Y., Xu,X., Sun,L., Chen,S.,
               Nie,H., Peng,J., Xu,J., Wang,Y., Yuan,Z., Wen,Y., Yao,Z., Shen,Y.,
               Qiang,B., Hou,Y., Yu,J. and Jin,Q.
     TITLE     Genome dynamics and diversity of Shigella species, the etiologic
               agents of bacillary dysentery
     JOURNAL   Nucleic Acids Res. 33 (19), 6445-6458 (2005)
      PUBMED   16275786
   REFERENCE   2  (bases 1 to 4519823)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (18-NOV-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4519823)
     AUTHORS   Jin,Q., Yang,F., Yang,J., Jiang,Y., Yan,Y., Chen,L., Zhang,X.,
               Peng,J., Tang,X., Xiong,Z., Nie,H., Dong,J., Xue,Y., Xu,X., Zhu,Y.,
               Shen,Y., Qiang,B. and Hou,Y.
     TITLE     Direct Submission
     JOURNAL   Submitted (29-OCT-2004) State Key Laboratory for Moleclular
               Virology and Genetic Engineering, Microbial Genome Center of
               Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA,
               Beijing 100176, P. R. China
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000036.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
209747	211288	+	1542	82542618	SBO_0190	-	16S ribosomal RNA
211357	211433	+	77	82542618	SBO_0191	-	^{14 Ile tRNA}
211476	211551	+	76	82542618	SBO_0192	-	^{02 Ala tRNA}
211735	214638	+	2904	82542618	SBO_0193	-	23S ribosomal RNA
214733	214851	+	119	82542618	SBO_0194	-	5S ribosomal RNA
214904	214980	+	77	82542618	SBO_0195	-	^{06 Asp tRNA}
222886	222962	+	77	82542618	SBO_0205	-	^{06 Asp tRNA}
266336	266411	+	76	82542618	SBO_0250	-	^{12 Thr tRNA}
445969	446045	+	77	82542618	SBO_0432	-	^{11 Arg tRNA}
547311	547385	-	75	82542618	SBO_0527	-	^{05 Gln tRNA}
547423	547497	-	75	82542618	SBO_0528	-	^{05 Gln tRNA}
547546	547622	-	77	82542618	SBO_0530	-	^{16 Met tRNA}
547638	547712	-	75	82542618	SBO_0531	-	^{05 Gln tRNA}
547747	547821	-	75	82542618	SBO_0533	-	^{05 Gln tRNA}
547845	547929	-	85	82542618	SBO_0534	-	^{15 Leu tRNA}
547938	548014	-	77	82542618	SBO_0535	-	^{16 Met tRNA}
625123	625198	+	76	82542618	SBO_0602	-	^{10 Lys tRNA}
625334	625409	+	76	82542618	SBO_0603	-	^{13 Val tRNA}
625413	625488	+	76	82542618	SBO_0604	-	^{10 Lys tRNA}
646877	646953	+	77	82542618	SBO_0627	-	^{16 Met tRNA}
646955	647031	+	77	82542618	SBO_0628	-	^{11 Arg tRNA}
647034	647109	+	76	82542618	SBO_0629	-	^{12 Thr tRNA}
647113	647187	+	75	82542618	SBO_0630	-	^{01 Gly tRNA}
828688	828775	-	88	82542618	SBO_0816	-	^{08 Ser tRNA}
1003287	1003376	-	90	82542618	SBO_0978	-	^{08 Ser tRNA}
1004368	1004443	+	76	82542618	SBO_0980	-	^{07 Asn tRNA}
1104335	1104410	+	76	82542618	SBO_1095	-	^{01 Gly tRNA}
1104465	1104538	+	74	82542618	SBO_1096	-	^{19 Cys tRNA}
1104551	1104637	+	87	82542618	SBO_1097	-	^{15 Leu tRNA}
1212421	1212496	-	76	82542618	SBO_1214	-	^{07 Asn tRNA}
1215142	1215217	-	76	82542618	SBO_1218	-	^{07 Asn tRNA}
1216950	1217025	+	76	82542618	SBO_1220	-	^{07 Asn tRNA}
1442481	1442557	-	77	82542618	SBO_1466	-	^{13 Val tRNA}
1687120	1687195	-	76	82542618	SBO_1701	-	^{12 Thr tRNA}
1687198	1687274	-	77	82542618	SBO_1702	-	^{11 Arg tRNA}
1687276	1687352	-	77	82542618	SBO_1703	-	^{16 Met tRNA}
1816221	1816305	+	85	82542618	SBO_1838	-	^{18 Tyr tRNA}
1908627	1908703	-	77	82542618	SBO_1931	-	^{11 Arg tRNA}
1908717	1908793	-	77	82542618	SBO_1932	-	^{11 Arg tRNA}
1908801	1908876	-	76	82542618	SBO_1933	-	^{16 Met tRNA}
2003033	2003120	+	88	82542618	SBO_2036	-	^{08 Ser tRNA}
2108736	2108812	-	77	82542618	SBO_2135	-	^{03 Pro tRNA}
2248602	2248689	+	88	82542618	SBO_2260	-	^{08 Ser tRNA}
2380195	2380269	+	75	82542618	SBO_2390	-	^{11 Arg tRNA}
2420062	2420137	-	76	82542618	SBO_2422	-	^{02 Ala tRNA}
2420177	2420252	-	76	82542618	SBO_2423	-	^{02 Ala tRNA}
2422951	2423026	+	76	82542618	SBO_2427	-	^{13 Val tRNA}
2423070	2423145	+	76	82542618	SBO_2428	-	^{13 Val tRNA}
2423192	2423267	+	76	82542618	SBO_2429	-	^{13 Val tRNA}
2423272	2423347	+	76	82542618	SBO_2430	-	^{10 Lys tRNA}
2625750	2625868	-	119	82542618	SBO_2620	-	5S ribosomal RNA
2625963	2628866	-	2904	82542618	SBO_2621	-	23S ribosomal RNA
2629050	2629125	-	76	82542618	SBO_2622	-	^{02 Ala tRNA}
2629168	2629244	-	77	82542618	SBO_2623	-	^{14 Ile tRNA}
2629313	2630854	-	1542	82542618	SBO_2624	-	16S ribosomal RNA
2703853	2703929	+	77	82542618	SBO_2697	-	^{16 Met tRNA}
2703963	2704039	+	77	82542618	SBO_2698	-	^{16 Met tRNA}
2704072	2704148	+	77	82542618	SBO_2699	-	^{16 Met tRNA}
2833374	2833466	+	93	82542618	SBO_2823	-	^{08 Ser tRNA}
2833470	2833546	+	77	82542618	SBO_2824	-	^{11 Arg tRNA}
2833744	2833820	+	77	82542618	SBO_2825	-	^{11 Arg tRNA}
2834019	2834095	+	77	82542618	SBO_2826	-	^{11 Arg tRNA}
2932228	2932303	+	76	82542618	SBO_2928	-	^{16 Met tRNA}
3021600	3021675	-	76	82542618	SBO_3022	-	^{17 Phe tRNA}
3126814	3126887	+	74	82542618	SBO_3122	-	^{01 Gly tRNA}
3212833	3212919	+	87	82542618	SBO_3208	-	^{15 Leu tRNA}
3216702	3216778	+	77	82542618	SBO_3211	-	^{16 Met tRNA}
3271696	3271812	+	117	82542618	SBO_3266	-	5S ribosomal RNA
3271853	3271928	-	76	82542618	SBO_3267	-	^{12 Thr tRNA}
3271941	3272059	-	119	82542618	SBO_3268	-	5S ribosomal RNA
3272154	3275057	-	2904	82542618	SBO_3269	-	23S ribosomal RNA
3275241	3275316	-	76	82542618	SBO_3270	-	^{02 Ala tRNA}
3275359	3275435	-	77	82542618	SBO_3271	-	^{14 Ile tRNA}
3275504	3277045	-	1542	82542618	SBO_3272	-	16S ribosomal RNA
3554060	3554136	-	77	82542618	SBO_3544	-	^{03 Pro tRNA}
3732158	3732252	-	95	82542618	SBO_3719	-	Sec tRNA
3790015	3791556	+	1542	82542618	SBO_3769	-	16S ribosomal RNA
3791642	3791717	+	76	82542618	SBO_3770	-	^{04 Glu tRNA}
3791911	3794814	+	2904	82542618	SBO_3771	-	23S ribosomal RNA
3794909	3795027	+	119	82542618	SBO_3772	-	5S ribosomal RNA
3795080	3795156	+	77	82542618	SBO_3773	-	^{06 Asp tRNA}
3795165	3795240	+	76	82542618	SBO_3774	-	^{20 Trp tRNA}
3831861	3831937	+	77	82542618	SBO_3808	-	^{11 Arg tRNA}
3831996	3832071	+	76	82542618	SBO_3809	-	^{09 His tRNA}
3832092	3832178	+	87	82542618	SBO_3810	-	^{15 Leu tRNA}
3832221	3832297	+	77	82542618	SBO_3811	-	^{03 Pro tRNA}
3888805	3890346	+	1542	82542618	SBO_3863	-	16S ribosomal RNA
3890415	3890491	+	77	82542618	SBO_3864	-	^{14 Ile tRNA}
3890534	3890609	+	76	82542618	SBO_3865	-	^{02 Ala tRNA}
3890793	3893696	+	2904	82542618	SBO_3866	-	23S ribosomal RNA
3893791	3893909	+	119	82542618	SBO_3867	-	5S ribosomal RNA
4025240	4026781	+	1542	82542618	SBO_3987	-	16S ribosomal RNA
4026850	4026926	+	77	82542618	SBO_3988	-	^{14 Ile tRNA}
4026969	4027044	+	76	82542618	SBO_3989	-	^{02 Ala tRNA}
4027228	4030131	+	2904	82542618	SBO_3990	-	23S ribosomal RNA
4030226	4030344	+	119	82542618	SBO_3991	-	5S ribosomal RNA
4033810	4033885	+	76	82542618	SBO_3996	-	^{12 Thr tRNA}
4033894	4033978	+	85	82542618	SBO_3997	-	^{18 Tyr tRNA}
4034095	4034169	+	75	82542618	SBO_3998	-	^{01 Gly tRNA}
4034176	4034251	+	76	82542618	SBO_3999	-	^{12 Thr tRNA}
4066550	4068091	+	1542	82542618	SBO_4028	-	16S ribosomal RNA
4068177	4068252	+	76	82542618	SBO_4029	-	^{04 Glu tRNA}
4068446	4071349	+	2904	82542618	SBO_4030	-	23S ribosomal RNA
4071444	4071562	+	119	82542618	SBO_4031	-	5S ribosomal RNA
4228827	4228911	-	85	82542618	SBO_4175	-	^{15 Leu tRNA}
4341622	4341697	-	76	82542618	SBO_4291	-	^{01 Gly tRNA}
4341733	4341808	-	76	82542618	SBO_4292	-	^{01 Gly tRNA}
4341844	4341919	-	76	82542618	SBO_4293	-	^{01 Gly tRNA}
4342077	4342152	-	76	82542618	SBO_4294	-	^{01 Gly tRNA}
4371472	4371547	+	76	82542618	SBO_4321	-	^{17 Phe tRNA}
4483558	4483644	-	87	82542618	SBO_4429	-	^{15 Leu tRNA}
4483679	4483765	-	87	82542618	SBO_4430	-	^{15 Leu tRNA}
4483794	4483880	-	87	82542618	SBO_4431	-	^{15 Leu tRNA}