Геном прокариот/Материалы:NC 007677

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   LOCUS       NC_007677            3551823 bp    DNA     circular BCT 30-MAR-2006
   DEFINITION  Salinibacter ruber DSM 13855, complete genome.
   ACCESSION   NC_007677
   VERSION     NC_007677.1  GI:83814055
   KEYWORDS    .
   SOURCE      Salinibacter ruber DSM 13855
     ORGANISM  Salinibacter ruber DSM 13855
               Bacteria; Bacteroidetes; Sphingobacteria; Sphingobacteriales;
               Sphingobacteriales genera incertae sedis; Salinibacter.
   REFERENCE   1  (bases 1 to 3551823)
     AUTHORS   Mongodin,E.F., Nelson,K.E., Daugherty,S., Deboy,R.T., Wister,J.,
               Khouri,H., Weidman,J., Walsh,D.A., Papke,R.T., Sanchez Perez,G.,
               Sharma,A.K., Nesbo,C.L., Macleod,D., Bapteste,E., Doolittle,W.F.,
               Charlebois,R.L., Legault,B. and Rodriguez-Valera,F.
     TITLE     The genome of Salinibacter ruber: Convergence and gene exchange
               among hyperhalophilic bacteria and archaea
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 102 (50), 18147-18152 (2005)
      PUBMED   16330755
   REFERENCE   2  (bases 1 to 3551823)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (22-DEC-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3551823)
     AUTHORS   Mongodin,E.F., Nelson,K.E., Daugherty,S.C., DeBoy,R.T., Wister,J.,
               Khouri,H.M., Weidman,J., Walsh,D.A., Papke,R.T., Sanchez Perrez,G.,
               Sharma,A.K., Nesbo,C.L., MacLeod,D., Bapteste,E., Doolittle,W.F.,
               Charlebois,R.L., Legault,B. and Rodriguez-Valera,F.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-NOV-2005) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000159.
               COMPLETENESS: full length.
               Salinibacter ruber strain M31T DSM13855 was obtained from the DSMZ
               (German Collection of Microorganisms and Cell Cultures) culture
               collection at
               http://www.dsmz.de/microorganisms/html/strains/strain.dsm013855.htm
               l . The S. ruber growth medium is described at
               http://www.dsmz.de/microorganisms/html/media/medium000936.html
               (DSMZ medium 936).


Расположение РНК править

Начало Конец Направление Длина PID Ген COG Комментарий
22670 22743 + 74 83814055 SRU_0024 - 03 Pro tRNA
23159 23232 + 74 83814055 SRU_0025 - 19 Cys tRNA
30547 30638 - 92 83814055 SRU_0032 - 08 Ser tRNA
49204 49277 - 74 83814055 SRU_0051 - 13 Val tRNA
49371 49445 - 75 83814055 SRU_0052 - 01 Gly tRNA
520184 520260 - 77 83814055 SRU_0379 - 16 Met tRNA
674818 674894 + 77 83814055 SRU_0500 - 13 Val tRNA
993196 993273 + 78 83814055 SRU_0782 - 11 Arg tRNA
1038615 1038688 - 74 83814055 SRU_0816 - 05 Gln tRNA
1099418 1099494 - 77 83814055 SRU_0856 - 16 Met tRNA
1174276 1174368 + 93 83814055 SRU_0917 - 08 Ser tRNA
1216255 1216327 + 73 83814055 SRU_0949 - 11 Arg tRNA
1342564 1342640 + 77 83814055 SRU_1069 - 09 His tRNA
1342677 1342754 + 78 83814055 SRU_1070 - 04 Glu tRNA
1352109 1352181 + 73 83814055 SRU_1082 - 02 Ala tRNA
1401828 1402196 - 369 83814055 SRU_1111 - sRNA
1490273 1490345 + 73 83814055 SRU_1180 - 02 Ala tRNA
1555130 1555203 + 74 83814055 SRU_1238 - 11 Arg tRNA
1852407 1852483 + 77 83814055 SRU_1485 - 10 Lys tRNA
1894048 1894121 - 74 83814055 SRU_1522 - 03 Pro tRNA
1922925 1923016 - 92 83814055 SRU_1543 - 08 Ser tRNA
2003871 2003946 + 76 83814055 SRU_1610 - 17 Phe tRNA
2049656 2049731 - 76 83814055 SRU_1649 - 12 Thr tRNA
2126357 2126430 + 74 83814055 SRU_1717 - 11 Arg tRNA
2181297 2181372 - 76 83814055 SRU_1765 - 20 Trp tRNA
2247305 2247376 - 72 83814055 SRU_1813 - 16 Met tRNA
2247492 2247566 - 75 83814055 SRU_1814 - 12 Thr tRNA
2247586 2247657 - 72 83814055 SRU_1815 - 01 Gly tRNA
2247719 2247804 - 86 83814055 SRU_1816 - 18 Tyr tRNA
2271497 2271572 - 76 83814055 SRU_1836 - 01 Gly tRNA
2325181 2325269 + 89 83814055 SRU_1883 - 15 Leu tRNA
2342889 2342963 - 75 83814055 SRU_1897 - 06 Asp tRNA
2460376 2460463 + 88 83814055 SRU_1989 - 15 Leu tRNA
2517508 2517592 - 85 83814055 SRU_2033 - 15 Leu tRNA
2520028 2520102 + 75 83814055 SRU_2035 - 07 Asn tRNA
2865704 2865779 - 76 83814055 SRU_2300 - 05 Gln tRNA
2877352 2877425 + 74 83814055 SRU_2310 - 10 Lys tRNA
2877516 2877604 + 89 83814055 SRU_2311 - 15 Leu tRNA
2958346 2958422 - 77 83814055 SRU_2379 - 03 Pro tRNA
3075011 3075083 - 73 83814055 SRU_2472 - 12 Thr tRNA
3313684 3313756 - 73 83814055 SRU_2675 - 04 Glu tRNA
3324764 3324873 - 110 83814055 SRU_2687 - 5S ribosomal RNA
3325001 3327939 - 2939 83814055 SRU_2688 - 23S ribosomal RNA
3328157 3328232 - 76 83814055 SRU_2689 - 02 Ala tRNA
3328246 3328320 - 75 83814055 SRU_2690 - 14 Ile tRNA
3328508 3330049 - 1542 83814055 SRU_2691 - 16S ribosomal RNA
3458760 3458833 + 74 83814055 SRU_2801 - 13 Val tRNA
3536874 3536960 - 87 83814055 SRU_2857 - 08 Ser tRNA