Материалы:NC 007761

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007761            4381608 bp    DNA     circular BCT 10-MAR-2006
   DEFINITION  Rhizobium etli CFN 42, complete genome.
   ACCESSION   NC_007761
   VERSION     NC_007761.1  GI:86355669
   KEYWORDS    .
   SOURCE      Rhizobium etli CFN 42
     ORGANISM  Rhizobium etli CFN 42
               Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
               Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
   REFERENCE   1  (bases 1 to 4381608)
     AUTHORS   Gonzalez,V., Santamaria,R.I., Bustos,P., Hernandez-Gonzalez,I.,
               Medrano-Soto,A., Moreno-Hagelsieb,G., Janga,S.C., Ramirez,M.A.,
               Jimenez-Jacinto,V., Collado-Vides,J. and Davila,G.
     TITLE     The partitioned Rhizobium etli genome: Genetic and metabolic
               redundancy in seven interacting replicons
     JOURNAL   (er) Proc. Natl. Acad. Sci. U.S.A. (2006) In press
      PUBMED   16505379
   REFERENCE   2  (bases 1 to 4381608)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (02-FEB-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4381608)
     AUTHORS   Gonzalez,V., Santamaria,R.I., Bustos,P., Hernandez-Gonzalez,I.,
               Medrano-Soto,A., Moreno-Hagelsieb,G., Chandra-Janga,S.,
               Ramirez-Romero,M.A., Collado-Vides,J. and Davila,G.
     TITLE     Direct Submission
     JOURNAL   Submitted (07-SEP-2005) Centro de Ciencias Genomicas, UNAM, Av.
               Universidad S/N, Col. Chamilpa, Cuernavaca 62210, Mexico
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000133.
               Web page of the Rhizobium etli genome project:
               http:www.ccg.unam.mx/retlidb
               Rhizobium etli strain CFN42 is available from the culture
               collection maintained at the Centro de Ciencias Genomicas-UNAM.
               Contact address: Dra. Susana Brom, e-mail sbrom@ccg.unam.mx.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
62590	64098	+	1509	86355669	RHE_CH00059	-	16S Ribosomal RNA
64312	64388	+	77	86355669	RHE_CH00060	-	^{14 Ile tRNA}
64473	64548	+	76	86355669	RHE_CH00061	-	^{02 Ala tRNA}
65213	68089	+	2877	86355669	RHE_CH00062	-	23S ribosomal RNA
68287	68405	+	119	86355669	RHE_CH00063	-	5S ribosomal RNA
68498	68574	+	77	86355669	RHE_CH00064	-	^{16 Met tRNA}
111183	111258	+	76	86355669	RHE_CH00100	-	^{02 Ala tRNA}
200136	200225	-	90	86355669	RHE_CH00185	-	^{08 Ser tRNA}
257742	257826	-	85	86355669	RHE_CH00242	-	^{15 Leu tRNA}
456284	456360	+	77	86355669	RHE_CH00442	-	^{11 Arg tRNA}
521396	521471	-	76	86355669	RHE_CH00504	-	^{12 Thr tRNA}
542310	542383	+	74	86355669	RHE_CH00525	-	^{01 Gly tRNA}
601642	601716	-	75	86355669	RHE_CH00577	-	^{12 Thr tRNA}
607869	607944	+	76	86355669	RHE_CH00587	-	^{17 Phe tRNA}
752635	752711	+	77	86355669	RHE_CH00722	-	^{09 His tRNA}
825147	825220	-	74	86355669	RHE_CH00787	-	^{05 Gln tRNA}
1064583	1064657	+	75	86355669	RHE_CH01014	-	^{05 Gln tRNA}
1080635	1080711	+	77	86355669	RHE_CH01026	-	^{03 Pro tRNA}
1407323	1407413	+	91	86355669	RHE_CH01348	-	^{08 Ser tRNA}
1627025	1627101	+	77	86355669	RHE_CH01547	-	^{03 Pro tRNA}
1682135	1682210	-	76	86355669	RHE_CH01599	-	^{13 Val tRNA}
1682625	1682701	+	77	86355669	RHE_CH01600	-	^{06 Asp tRNA}
1682753	1682829	+	77	86355669	RHE_CH01601	-	^{06 Asp tRNA}
1744080	1744155	+	76	86355669	RHE_CH01652	-	^{12 Thr tRNA}
1747046	1747130	+	85	86355669	RHE_CH01656	-	^{18 Tyr tRNA}
1747155	1747228	+	74	86355669	RHE_CH01657	-	^{01 Gly tRNA}
1750308	1750383	+	76	86355669	RHE_CH01660	-	^{20 Trp tRNA}
1890339	1890413	-	75	86355669	RHE_CH01804	-	^{07 Asn tRNA}
1892266	1892339	+	74	86355669	RHE_CH01808	-	^{19 Cys tRNA}
1928519	1928603	+	85	86355669	RHE_CH01841	-	^{15 Leu tRNA}
1965978	1966052	-	75	86355669	RHE_CH01880	-	^{04 Glu tRNA}
1966227	1966301	-	75	86355669	RHE_CH01881	-	^{04 Glu tRNA}
1966377	1966451	-	75	86355669	RHE_CH01882	-	^{04 Glu tRNA}
1969657	1969733	-	77	86355669	RHE_CH01887	-	^{03 Pro tRNA}
1970730	1970806	+	77	86355669	RHE_CH01889	-	^{11 Arg tRNA}
2049580	2049655	+	76	86355669	RHE_CH01965	-	^{10 Lys tRNA}
2270497	2270586	+	90	86355669	RHE_CH02164	-	^{08 Ser tRNA}
2325590	2325674	-	85	86355669	RHE_CH02222	-	^{15 Leu tRNA}
2832313	2832388	-	76	86355669	RHE_CH02719	-	^{10 Lys tRNA}
3051846	3051921	+	76	86355669	RHE_CH02918	-	^{16 Met tRNA}
3334716	3334792	+	77	86355669	RHE_CH03175	-	^{11 Arg tRNA}
3571852	3571928	-	77	86355669	RHE_CH03398	-	^{16 Met tRNA}
3572021	3572139	-	119	86355669	RHE_CH03399	-	5S ribosomal RNA
3572337	3575213	-	2877	86355669	RHE_CH03400	-	23S ribosomal RNA
3575878	3575953	-	76	86355669	RHE_CH03401	-	^{02 Ala tRNA}
3576038	3576114	-	77	86355669	RHE_CH03402	-	^{14 Ile tRNA}
3576324	3577836	-	1513	86355669	RHE_CH03403	-	16S Ribosomal RNA
3634872	3634948	-	77	86355669	RHE_CH03451	-	^{16 Met tRNA}
3770456	3770530	+	75	86355669	RHE_CH03576	-	^{13 Val tRNA}
3968813	3968889	-	77	86355669	RHE_CH03746	-	^{16 Met tRNA}
3968982	3969100	-	119	86355669	RHE_CH03747	-	5S ribosomal RNA
3969298	3972174	-	2877	86355669	RHE_CH03748	-	23S ribosomal RNA
3972839	3972914	-	76	86355669	RHE_CH03749	-	^{02 Ala tRNA}
3972999	3973075	-	77	86355669	RHE_CH03750	-	^{14 Ile tRNA}
3973285	3974797	-	1513	86355669	RHE_CH03751	-	16S Ribosomal RNA
4006536	4006620	+	85	86355669	RHE_CH03777	-	^{15 Leu tRNA}
4058204	4058280	+	77	86355669	RHE_CH03834	-	^{11 Arg tRNA}
4206815	4206889	+	75	86355669	RHE_CH03981	-	^{01 Gly tRNA}
4306772	4306861	-	90	86355669	RHE_CH04061	-	^{08 Ser tRNA}