Геном прокариот/Материалы:NC 007775

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007775            2932766 bp    DNA     circular BCT 30-MAR-2006
   DEFINITION  Synechococcus sp. JA-3-3Ab, complete genome.
   ACCESSION   NC_007775
   VERSION     NC_007775.1  GI:86604733
   KEYWORDS    .
   SOURCE      Synechococcus sp. JA-3-3Ab
     ORGANISM  Synechococcus sp. JA-3-3Ab
               Bacteria; Cyanobacteria; Chroococcales; Synechococcus.
   REFERENCE   1  (bases 1 to 2932766)
     AUTHORS   Allewalt,J.P., Bateson,M.M., Revsbech,N.P., Slack,K. and Ward,D.M.
     TITLE     Effect of temperature and light on growth of and photosynthesis by
               Synechococcus isolates typical of those predominating in the
               octopus spring microbial mat community of Yellowstone National Park
     JOURNAL   Appl. Environ. Microbiol. 72 (1), 544-550 (2006)
      PUBMED   16391090
   REFERENCE   2  (bases 1 to 2932766)
     AUTHORS   Bateson,M.M. and Ward,D.M.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-MAR-2006) Department of Land Resources and
               Environmental Sciences, Montana State University - Bozeman, 334
               Leon Johnson Hall P.O. Box 173120, Bozeman, MT 59717-3120, USA
     REMARK    Sequence update by submitter
   REFERENCE   3  (bases 1 to 2932766)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (07-FEB-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   4  (bases 1 to 2932766)
     AUTHORS   Heidelberg,J.
     TITLE     Direct Submission
     JOURNAL   Submitted (22-DEC-2005) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000239.
               COMPLETENESS: full length.

Расположение РНК править

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
32386	32458	-	73	86604733	CYA_0033	-	^{16 Met tRNA}
167006	167083	-	78	86604733	CYA_0168	-	^{11 Arg tRNA}
253975	254046	+	72	86604733	CYA_0250	-	^{07 Asn tRNA}
369842	369913	-	72	86604733	CYA_0351	-	^{01 Gly tRNA}
470364	470435	+	72	86604733	CYA_0451	-	^{16 Met tRNA}
664036	664109	+	74	86604733	CYA_0655	-	^{11 Arg tRNA}
679734	679805	+	72	86604733	CYA_0670	-	^{01 Gly tRNA}
760753	760832	+	80	86604733	CYA_0755	-	^{15 Leu tRNA}
837478	837551	+	74	86604733	CYA_0823	-	^{11 Arg tRNA}
994002	994075	-	74	86604733	CYA_0980	-	^{16 Met tRNA}
1035752	1036152	-	401	86604733	CYA_1017	-	sRNA
1036257	1036328	+	72	86604733	CYA_1018	-	^{10 Lys tRNA}
1106587	1106706	-	120	86604733	CYA_1085	-	5S ribosomal RNA
1106765	1109571	-	2807	86604733	CYA_1086	-	23S ribosomal RNA
1109696	1109771	-	76	86604733	CYA_1087	-	^{02 Ala tRNA}
1109808	1109881	-	74	86604733	CYA_1088	-	^{14 Ile tRNA}
1110127	1111450	-	1324	86604733	CYA_1089	-	16S ribosomal RNA
1205694	1205766	-	73	86604733	CYA_1191	-	^{04 Glu tRNA}
1210512	1210602	-	91	86604733	CYA_1198	-	^{08 Ser tRNA}
1217328	1217408	+	81	86604733	CYA_1207	-	^{15 Leu tRNA}
1345120	1345192	-	73	86604733	CYA_1330	-	^{17 Phe tRNA}
1355452	1355523	-	72	86604733	CYA_1344	-	^{10 Lys tRNA}
1355624	1356022	+	399	86604733	CYA_1345	-	sRNA
1361661	1361736	-	76	86604733	CYA_1348	-	^{11 Arg tRNA}
1363175	1363248	+	74	86604733	CYA_1352	-	^{03 Pro tRNA}
1415958	1416029	+	72	86604733	CYA_1410	-	^{13 Val tRNA}
1430438	1430510	-	73	86604733	CYA_1422	-	^{02 Ala tRNA}
1470167	1470239	+	73	86604733	CYA_1464	-	^{02 Ala tRNA}
1607074	1607145	+	72	86604733	CYA_1596	-	^{19 Cys tRNA}
1622360	1622435	-	76	86604733	CYA_1618	-	^{20 Trp tRNA}
1638093	1638166	-	74	86604733	CYA_1637	-	^{03 Pro tRNA}
1790745	1790817	+	73	86604733	CYA_1790	-	^{09 His tRNA}
1822297	1822383	-	87	86604733	CYA_1815	-	^{15 Leu tRNA}
1857612	1857695	-	84	86604733	CYA_1853	-	^{15 Leu tRNA}
1890240	1890313	+	74	86604733	CYA_1884	-	^{06 Asp tRNA}
1964028	1964115	+	88	86604733	CYA_1952	-	^{08 Ser tRNA}
1989763	1989836	+	74	86604733	CYA_1972	-	^{03 Pro tRNA}
2255503	2255590	-	88	86604733	CYA_2244	-	^{08 Ser tRNA}
2277877	2277957	-	81	86604733	CYA_2268	-	^{15 Leu tRNA}
2291451	2291522	-	72	86604733	CYA_2287	-	^{13 Val tRNA}
2305106	2305177	+	72	86604733	CYA_2303	-	^{13 Val tRNA}
2310397	2311720	+	1324	86604733	CYA_2307	-	16S ribosomal RNA
2311966	2312039	+	74	86604733	CYA_2308	-	^{14 Ile tRNA}
2312076	2312151	+	76	86604733	CYA_2309	-	^{02 Ala tRNA}
2312276	2315082	+	2807	86604733	CYA_2310	-	23S ribosomal RNA
2315141	2315260	+	120	86604733	CYA_2311	-	5S ribosomal RNA
2409055	2409127	-	73	86604733	CYA_2397	-	^{12 Thr tRNA}
2500377	2500463	+	87	86604733	CYA_2490	-	Xaa tRNA
2693023	2693094	+	72	86604733	CYA_2677	-	^{05 Gln tRNA}
2766302	2766374	+	73	86604733	CYA_2745	-	^{12 Thr tRNA}
2792396	2792466	-	71	86604733	CYA_2770	-	^{01 Gly tRNA}
2858802	2858884	-	83	86604733	CYA_2840	-	^{15 Leu tRNA}
2863555	2863639	-	85	86604733	CYA_2847	-	^{08 Ser tRNA}
2921457	2921542	+	86	86604733	CYA_2896	-	^{18 Tyr tRNA}
2921547	2921618	+	72	86604733	CYA_2898	-	^{12 Thr tRNA}