Геном прокариот/Материалы:NC 007952

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   LOCUS       NC_007952            3363523 bp    DNA     circular BCT 12-DEC-2006
   DEFINITION  Burkholderia xenovorans LB400 chromosome 2, complete sequence.
   ACCESSION   NC_007952
   VERSION     NC_007952.1  GI:91777110
   KEYWORDS    .
   SOURCE      Burkholderia xenovorans LB400
     ORGANISM  Burkholderia xenovorans LB400
               Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
               Burkholderiaceae; Burkholderia.
   REFERENCE   1  (bases 1 to 3363523)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Kyrpides,N., Lykidis,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Chromosome 2 of Burkholderia xenovorans LB400
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 3363523)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (11-APR-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3363523)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
               del Rio,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
               Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
               Kyrpides,N., Lykidis,A. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (13-MAR-2006) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000271.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 2351477
               Source DNA and bacteria available from Jim Tiedje
               (tiedjej@pilot.msu.edu)
               Contacts: Jim Tiedje (tiedjej@pilot.msu.edu)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LLNL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. it is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376).
               COMPLETENESS: full length.


Расположение РНК править

Начало Конец Направление Длина PID Ген COG Комментарий
539551 541040 + 1490 91777110 Bxe_BR0001 - 16S ribosomal RNA
541113 541189 + 77 91777110 Bxe_BR0002 - 14 Ile tRNA
541271 541346 + 76 91777110 Bxe_BR0003 - 02 Ala tRNA
541641 544522 + 2882 91777110 Bxe_BR0004 - 23S ribosomal RNA
544698 544811 + 114 91777110 Bxe_BR0005 - 5S ribosomal RNA
554750 554826 + 77 91777110 Bxe_BR0006 - 13 Val tRNA
570311 570406 + 96 91777110 Bxe_BR0086 - Sec tRNA
1300717 1302206 + 1490 91777110 Bxe_BR0007 - 16S ribosomal RNA
1302278 1302354 + 77 91777110 Bxe_BR0008 - 14 Ile tRNA
1302436 1302511 + 76 91777110 Bxe_BR0009 - 02 Ala tRNA
1302806 1305687 + 2882 91777110 Bxe_BR0010 - 23S ribosomal RNA
1305862 1305975 + 114 91777110 Bxe_BR0011 - 5S ribosomal RNA
1556131 1557620 + 1490 91777110 Bxe_BR0012 - 16S ribosomal RNA
1557693 1557769 + 77 91777110 Bxe_BR0013 - 14 Ile tRNA
1557851 1557926 + 76 91777110 Bxe_BR0014 - 02 Ala tRNA
1558221 1561102 + 2882 91777110 Bxe_BR0015 - 23S ribosomal RNA
1561278 1561391 + 114 91777110 Bxe_BR0016 - 5S ribosomal RNA