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   LOCUS       NC_008253            4938920 bp    DNA     circular BCT 16-AUG-2007
   DEFINITION  Escherichia coli 536, complete genome.
   ACCESSION   NC_008253
   VERSION     NC_008253.1  GI:110640213
   KEYWORDS    .
   SOURCE      Escherichia coli 536
     ORGANISM  Escherichia coli 536
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Escherichia.
   REFERENCE   1  (bases 1 to 4938920)
     AUTHORS   Hochhut,B., Wilde,C., Balling,G., Middendorf,B., Dobrindt,U.,
               Brzuszkiewicz,E., Gottschalk,G., Carniel,E. and Hacker,J.
     TITLE     Role of pathogenicity island-associated integrases in the genome
               plasticity of uropathogenic Escherichia coli strain 536
     JOURNAL   Mol. Microbiol. 61 (3), 584-595 (2006)
      PUBMED   16879640
   REFERENCE   2  (bases 1 to 4938920)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (24-JUL-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4938920)
     AUTHORS   Brzuszkiewicz,E., Brueggemann,H., Liesegang,H., Emmerth,M.,
               Oelschlaeger,T., Nagy,G., Albermann,K., Wagner,C., Emody,L.,
               Gottschalk,G., Hacker,J. and Dobrind,U.
     TITLE     Direct Submission
     JOURNAL   Submitted (20-JAN-2006) Institute of Microbiology and Genetics,
               Georg August University Goettingen, Goettingen Genomics Laboratory,
               Grisebachstr. 8, Goettingen D-37077, Germany
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000247.
               COMPLETENESS: full length.


Расположение РНК

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Начало Конец Направление Длина PID Ген COG Комментарий
227931 229472 + 1542 110640213 ECP_4736 - 16S ribosomal RNA
229558 229633 + 76 110640213 ECP_0211 - 04 Glu tRNA
229827 232730 + 2904 110640213 ECP_4735 - 23S ribosomal RNA
232824 232943 + 120 110640213 ECP_4737 - 5S ribosomal RNA
232996 233072 + 77 110640213 ECP_0212 - 06 Asp tRNA
241221 241297 + 77 110640213 ECP_0222 - 06 Asp tRNA
294319 294394 + 76 110640213 ECP_0273 - 12 Thr tRNA
332397 332473 + 77 110640213 ECP_0310 - 11 Arg tRNA
426970 427050 + 81 110640213 ECP_0403 - Xaa tRNA
620974 621050 + 77 110640213 ECP_0592 - 11 Arg tRNA
723221 723295 - 75 110640213 ECP_4731 - 05 Gln tRNA
723333 723407 - 75 110640213 ECP_4730 - 05 Gln tRNA
723456 723532 - 77 110640213 ECP_4729 - 16 Met tRNA
795927 796002 + 76 110640213 ECP_0754 - 10 Lys tRNA
796038 796113 + 76 110640213 ECP_0755 - 13 Val tRNA
796116 796191 + 76 110640213 ECP_0756 - 10 Lys tRNA
796243 796318 + 76 110640213 ECP_0757 - 13 Val tRNA
796322 796397 + 76 110640213 ECP_0758 - 10 Lys tRNA
796446 796521 + 76 110640213 ECP_0759 - 10 Lys tRNA
796555 796630 + 76 110640213 ECP_0760 - 10 Lys tRNA
939676 939763 - 88 110640213 ECP_4728 - 08 Ser tRNA
1034999 1035086 - 88 110640213 ECP_4727 - 08 Ser tRNA
1088445 1088532 - 88 110640213 ECP_4726 - 08 Ser tRNA
1310055 1310139 - 85 110640213 ECP_4725 - 18 Tyr tRNA
1310173 1310257 - 85 110640213 ECP_4724 - 18 Tyr tRNA
1661394 1661470 + 77 110640213 ECP_1612 - 13 Val tRNA
1661475 1661551 + 77 110640213 ECP_1613 - 13 Val tRNA
1900668 1900754 - 87 110640213 ECP_4723 - 15 Leu tRNA
1900767 1900840 - 74 110640213 ECP_4722 - 19 Cys tRNA
1900894 1900969 - 76 110640213 ECP_4721 - 01 Gly tRNA
1970000 1970089 - 90 110640213 ECP_4720 - 08 Ser tRNA
1971081 1971156 + 76 110640213 ECP_1935 - 07 Asn tRNA
2010971 2011046 - 76 110640213 ECP_4719 - 07 Asn tRNA
2013380 2013455 - 76 110640213 ECP_4718 - 07 Asn tRNA
2015204 2015279 + 76 110640213 ECP_1961 - 07 Asn tRNA
2327058 2327134 + 77 110640213 ECP_2230 - 03 Pro tRNA
2496761 2496835 + 75 110640213 ECP_2385 - 11 Arg tRNA
2540120 2540195 - 76 110640213 ECP_4717 - 02 Ala tRNA
2540235 2540310 - 76 110640213 ECP_4716 - 02 Ala tRNA
2543009 2543084 + 76 110640213 ECP_2423 - 13 Val tRNA
2543129 2543204 + 76 110640213 ECP_2424 - 13 Val tRNA
2543251 2543326 + 76 110640213 ECP_2425 - 13 Val tRNA
2543331 2543406 + 76 110640213 ECP_2426 - 10 Lys tRNA
2734010 2734129 - 120 110640213 ECP_4734 - 5S ribosomal RNA
2734223 2737126 - 2904 110640213 ECP_4733 - 23S ribosomal RNA
2737320 2737395 - 76 110640213 ECP_4715 - 04 Glu tRNA
2737481 2739023 - 1543 110640213 ECP_4732 - 16S ribosomal RNA
2794935 2795011 - 77 110640213 ECP_4714 - 11 Arg tRNA
2795075 2795151 - 77 110640213 ECP_4713 - 11 Arg tRNA
2795214 2795290 - 77 110640213 ECP_4712 - 11 Arg tRNA
2795355 2795431 - 77 110640213 ECP_4711 - 11 Arg tRNA
2795435 2795527 - 93 110640213 ECP_4710 - 08 Ser tRNA
2940684 2940760 + 77 110640213 ECP_2797 - 16 Met tRNA
2940794 2940870 + 77 110640213 ECP_2798 - 16 Met tRNA
2940904 2940980 + 77 110640213 ECP_2799 - 16 Met tRNA
3018048 3018121 - 74 110640213 ECP_4709 - 01 Gly tRNA
3128084 3128159 + 76 110640213 ECP_2961 - 17 Phe tRNA
3327284 3327359 + 76 110640213 ECP_3159 - 16 Met tRNA
3428663 3428739 - 77 110640213 ECP_4708 - 16 Met tRNA
3432519 3432605 - 87 110640213 ECP_4707 - 15 Leu tRNA
3533150 3533262 - 113 110640213 ECP_4747 - 5S ribosomal RNA
3533303 3533378 - 76 110640213 ECP_4706 - 12 Thr tRNA
3533391 3533510 - 120 110640213 ECP_4746 - 5S ribosomal RNA
3533604 3536508 - 2905 110640213 ECP_4744 - 23S ribosomal RNA
3536702 3536777 - 76 110640213 ECP_4705 - 04 Glu tRNA
3536863 3538404 - 1542 110640213 ECP_4745 - 16S ribosomal RNA
3822847 3822923 - 77 110640213 ECP_4704 - 03 Pro tRNA
3947789 3947879 + 91 110640213 ECP_3764 - Sec tRNA
4125597 4127139 + 1543 110640213 ECP_4749 - 16S ribosomal RNA
4127225 4127300 + 76 110640213 ECP_3956 - 04 Glu tRNA
4127494 4130397 + 2904 110640213 ECP_4748 - 23S ribosomal RNA
4130491 4130610 + 120 110640213 ECP_4750 - 5S ribosomal RNA
4130662 4130738 + 77 110640213 ECP_3957 - 06 Asp tRNA
4130747 4130822 + 76 110640213 ECP_3958 - 20 Trp tRNA
4165293 4165369 + 77 110640213 ECP_3988 - 11 Arg tRNA
4165428 4165503 + 76 110640213 ECP_3989 - 09 His tRNA
4165524 4165610 + 87 110640213 ECP_3990 - 15 Leu tRNA
4165653 4165729 + 77 110640213 ECP_3991 - 03 Pro tRNA
4241392 4242933 + 1542 110640213 ECP_4742 - 16S ribosomal RNA
4243002 4243078 + 77 110640213 ECP_4064 - 14 Ile tRNA
4243121 4243196 + 76 110640213 ECP_4065 - 02 Ala tRNA
4243380 4246283 + 2904 110640213 ECP_4741 - 23S ribosomal RNA
4246377 4246496 + 120 110640213 ECP_4743 - 5S ribosomal RNA
4378773 4380323 + 1551 110640213 ECP_4752 - 16S ribosomal RNA
4380495 4380570 + 76 110640213 ECP_4185 - 04 Glu tRNA
4380764 4383667 + 2904 110640213 ECP_4751 - 23S ribosomal RNA
4383761 4383880 + 120 110640213 ECP_4753 - 5S ribosomal RNA
4387346 4387421 + 76 110640213 ECP_4189 - 12 Thr tRNA
4387430 4387514 + 85 110640213 ECP_4190 - 18 Tyr tRNA
4387631 4387705 + 75 110640213 ECP_4191 - 01 Gly tRNA
4387712 4387787 + 76 110640213 ECP_4192 - 12 Thr tRNA
4419039 4420580 + 1542 110640213 ECP_4739 - 16S ribosomal RNA
4420666 4420741 + 76 110640213 ECP_4220 - 04 Glu tRNA
4420935 4423838 + 2904 110640213 ECP_4738 - 23S ribosomal RNA
4423932 4424051 + 120 110640213 ECP_4740 - 5S ribosomal RNA
4593023 4593098 - 76 110640213 ECP_4703 - 17 Phe tRNA
4621978 4622053 + 76 110640213 ECP_4408 - 01 Gly tRNA
4622090 4622165 + 76 110640213 ECP_4409 - 01 Gly tRNA
4622201 4622276 + 76 110640213 ECP_4410 - 01 Gly tRNA
4735147 4735231 + 85 110640213 ECP_4520 - 15 Leu tRNA
4904315 4904401 - 87 110640213 ECP_4702 - 15 Leu tRNA
4904436 4904522 - 87 110640213 ECP_4701 - 15 Leu tRNA
4904551 4904637 - 87 110640213 ECP_4700 - 15 Leu tRNA